DC900123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_CAEEL (Histone H3 OS=Caenorhabditis elegans GN=his-2 PE=1 SV=4) HSP 1 Score: 214.157 bits (544), Expect = 3.536e-55 Identity = 110/132 (83.33%), Postives = 114/132 (86.36%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQLATKAARKSAPA+GGVKKPHR+RPGTVALREIR+YQKSTELLIR+ PFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H33A_LILLO (Histone H3.3a OS=Lilium longiflorum GN=MPH3 PE=2 SV=3) HSP 1 Score: 214.157 bits (544), Expect = 3.536e-55 Identity = 110/132 (83.33%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQD+K DLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDYKADLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_GRIJA (Histone H3 OS=Griffithsia japonica PE=2 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 6.031e-55 Identity = 109/131 (83.21%), Postives = 114/131 (87.02%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 393 KQTARKSTGGKAPRKQLATKAARKSAPA+GGVKKPHRFRPGTVALREIR++QKSTELL+RKLPFQRLVREIAQDFK+DLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRFRPGTVALREIRRFQKSTELLVRKLPFQRLVREIAQDFKSDLRFQSSAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3_VOLCA (Histone H3 OS=Volvox carteri GN=H3-I PE=3 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.029e-54 Identity = 112/132 (84.85%), Postives = 114/132 (86.36%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQLATKAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H32_CHLRE (Histone H3 type 2 OS=Chlamydomonas reinhardtii GN=ch3-II PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.029e-54 Identity = 112/132 (84.85%), Postives = 114/132 (86.36%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQLATKAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L_XENLA (Histone H3-like OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 1.755e-54 Identity = 109/132 (82.58%), Postives = 112/132 (84.85%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQL TKAA+K APATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H31_CHLRE (Histone H3 type 1 OS=Chlamydomonas reinhardtii GN=ch3-I PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.292e-54 Identity = 111/132 (84.09%), Postives = 114/132 (86.36%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQLATKAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTEL+IRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELVIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L5_ARATH (Putative histone H3-like 5 OS=Arabidopsis thaliana GN=At5g65350 PE=5 SV=3) HSP 1 Score: 210.69 bits (535), Expect = 3.909e-54 Identity = 109/132 (82.58%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTAR STGGKAPRKQLA KAAR+SAPATGGVKKPHRFRPGTVALR+IRKYQKSTE+LIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPK+IQLARRIRGERA Sbjct: 5 KQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTEILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKEIQLARRIRGERA 136
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H3L3_ARATH (Histone H3-like 3 OS=Arabidopsis thaliana GN=At1g75600 PE=2 SV=3) HSP 1 Score: 209.149 bits (531), Expect = 1.137e-53 Identity = 108/132 (81.82%), Postives = 111/132 (84.09%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKS GGKAPR LATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD+KTDLRF GLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA Sbjct: 5 KQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
BLAST of DC900123 vs. ExPASy Swiss-Prot
Match: H33_CHLRE (Histone H3 type 3 OS=Chlamydomonas reinhardtii GN=ch3-IV PE=1 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 1.486e-53 Identity = 111/132 (84.09%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 1 KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396 KQTARKSTGGKAPRKQLATKAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAI AKRVTIMPKDIQLARRIRGERA Sbjct: 5 KQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVVALQEAAEAYLVGLFEDTNLCAITAKRVTIMPKDIQLARRIRGERA 135 The following BLAST results are available for this feature:
BLAST of DC900123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900123 ID=DC900123; Name=DC900123; organism=Citrus sinensis; type=EST; length=555bpback to top |