CN186000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49 Identity = 97/214 (45.33%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 96 ESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 E + S F ++ + P + + + A+QIINDEL LDGN R NLA+F TW + KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E Q L+ Sbjct: 12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49 Identity = 97/214 (45.33%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 96 ESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 E + S F ++ + P + + + A+QIINDEL LDGN R NLA+F TW + KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E Q L+ Sbjct: 12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48 Identity = 96/214 (44.86%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 96 ESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 E + S F ++ + P + + + A+QIINDEL LDGN R NLA+F TW + KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP +KPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E Q L+ Sbjct: 12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46 Identity = 91/213 (42.72%), Postives = 134/213 (62.91%), Query Frame = 3 Query: 87 ESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDV 725 + +S++ + + +F + ++ E ++I DEL+LDGN + NLA+F T ++ +M I+KN +D DEYP + E++NRC++I+A L+NAP DS +G T GSSEA ML GLA K W+ RK G P+DKPNIVTG VQ+CW KFA YF++E++E+ + G YVM+ + ++ VDENTI V LG T ++EDV Sbjct: 7 DKHKSLYDNYVQSATTEEIAKFKLADDPNEPETIKKLIMDELLLDGNSKQNLATFCQTDLDKNIHSIMDKCIDKNMIDKDEYPQSAEIENRCLHILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIREIPMENGRYVMNSEEVLKRVDENTIGVIPTLGVTFTLQYEDV 216
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.946e-46 Identity = 95/226 (42.04%), Postives = 140/226 (61.95%), Query Frame = 3 Query: 81 FSESDESIHST-----FASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 +SE+D+ H + F S S+P++ + + + AYQ++ D+LM +GN R NLA+F T+ME E + LM + KN +D EYP T EL+NRCVNI+A L+NAP E S +G TVGSSEA ML GLA K +W+N + G +PN++ + QVCWEKF Y++V+++ V + + + +D K E+VDE TI + ILG T G+F+D+ LL+ Sbjct: 3 YSENDKRKHESYRIPLFGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKEMS--YLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKEHLSLDVEKVFELVDEYTIGIVGILGITYTGKFDDIALLD 226
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.731e-46 Identity = 92/227 (40.53%), Postives = 140/227 (61.67%), Query Frame = 3 Query: 63 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 M+ K + E + F S + LP++ + + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM + KN +D EYP TTE++NRCVN+IA L+NA + E +G T+GSSEA ML G+A K W+ + + G + KPN+V + QVCWEKF Y+++E++EV + + ++ K ++ VDE TI V I+G T G ++D++ L+ Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMGITYTGRYDDIKALD 225
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.731e-46 Identity = 92/227 (40.53%), Postives = 141/227 (62.11%), Query Frame = 3 Query: 63 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 M+ K + E + F S + LP++ + + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM + KN +D EYP TTE++NRCVN+IA L+NA + E +G T+GSSEA ML G+A K W+ + + G + KPN+V + QVCWEKF Y+++E++EV + + + ++ K ++ VDE TI V I+G T G ++D++ L+ Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMGITYTGRYDDIKALD 225
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.558e-45 Identity = 91/210 (43.33%), Postives = 133/210 (63.33%), Query Frame = 3 Query: 114 FASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 F S S+P++ + + + AYQ++ D+LM +GN R NLA+F T+ME E + LM + KN +D EYP T EL+NRCVNI+A L+NAP + S +G TVGSSEA ML GLA K +W+N + G +PN++ + QVCWEKF Y++V+++ V + + + +D K ++VDE TI V ILG T G+F+D+QLL+ Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKDMS--YLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGKFDDIQLLD 226
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.027e-42 Identity = 87/195 (44.62%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 147 RFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQ 728 ++++P+ +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ + KN D DEYP EL RC++++A+L++A E +G T GSSEAIML GLA K++W+++ K GK KPNI+ + QV EKF RYFEVE + V +S ++++DP + VDENTI ILG+T G E+V+ Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVE 251
BLAST of CN186000 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.716e-41 Identity = 88/227 (38.77%), Postives = 136/227 (59.91%), Query Frame = 3 Query: 63 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPF--DKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVQLLN 737 M+ SK ES + F S +P++T+ + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM + KN +D EYP T EL+NRCVNIIA L++AP + + +G T+GSSEA ML G+A K W+ + + G KPN+V + QVCWEKF Y++++++ V + + + ++ + ++ VDE TI V ILG T G ++D+ LN Sbjct: 1 MLYSKENKES--YLEPVFGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAPKD--QKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALN 223 The following BLAST results are available for this feature:
BLAST of CN186000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186000 ID=CN186000; Name=CN186000; organism=Citrus sinensis; type=EST; length=737bpback to top |