CN185997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.766e-29 Identity = 77/151 (50.99%), Postives = 91/151 (60.26%), Query Frame = -1 Query: 253 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEE--KNDKR-HRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 696 R NV DP S+D W D F + S A N R+DWKETP AHVF ADLPG+R +G +L ISGER++E++ KND+R H VERSSGKF RRFRLP A+V+QV ASM+NGVLTVT KAI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 59/134 (44.03%), Postives = 85/134 (63.43%), Query Frame = -1 Query: 307 GGRRTNVFDPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 702 GG +P S+D+ +PF D +A APS+A + + A +DWKET AHVF AD+PG+R E ++L+ISG+R++ EEK ++ HRVERSS +F+R RLP NA + V A+++NGVLT+T Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTIT 159
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = -1 Query: 307 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 576 AR+DWKETP+ HV D+PGL+ E R+L++SGER KE+E+K D HRVERS GKF R+FRLP N ++ VKA +ENGVLT+T Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLT 156
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 307 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 582 ++AR+DWKETP+ HV D+PGL+ E R+L++SGER KE+++K D HRVERS GKF R+F+LP N ++ VKA MENGVLT+T Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 164
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22 Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = -1 Query: 307 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 684 +FD + D W+PF F ++ +A A +TS FAN I+ +ET +A+VF+ADLP G++ EG +L I+GERS +EEK + H +ERS F RF LPD+A V+ V+ASM+ G+LTVT Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVT 131
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.123e-21 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = -1 Query: 310 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 600 R+TS + AR+DWKET + H D+PGL+ E +L++SGER +E+E+K D+ HRVERS GKF R+F+LPDN +E VKA +ENGVLT+ Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.066e-21 Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = -1 Query: 253 ILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 474 ILQISGER+ E+E+KND HRVERSSGKF+R FRLPDNAKV+QVKASMENGVLTVT KAIEISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.066e-17 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 310 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQ--EEKN--DKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 597 + + + AR+DW+ET AH D+PG+R + R+L+ISGER +E+ E+K D HR ERS G+F R+ RLPDNA ++ + AS++NGVLTV Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 307 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEG-RILQISGER-----SKEQEEKND--KRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 615 A ++A E + A AR DWKETP+AHV D+PG+R E R+L++SGER ++E+E + D + HR ER++G+F RRFR+P A V +V A +++GVLTVT Sbjct: 59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVT 169
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 307 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 618 NAPS R+ A D KE P ++VF D+PGL+ E +L ISGER +E+E++ K R+ER GKF+R+F LP+NA + + A ++GVLTVT Sbjct: 30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVT 135 The following BLAST results are available for this feature:
BLAST of CN185997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185997 ID=CN185997; Name=CN185997; organism=Citrus sinensis; type=EST; length=765bpback to top |