CN185997

Overview
NameCN185997
Unique NameCN185997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.473e-14
Identity = 51/125 (40.80%), Postives = 67/125 (53.60%), Query Frame = -1
Query:  307 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 666
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL          + R+L +SGER +E+ E + K  R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 144          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = -1
Query:  307 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 618
            NAP+    R+    A    D KE P ++VF  D+PG++         +  +L ISGER +E+E++  K  ++ER  GK +R+F LP+NA +E + A  ++GVLTVT
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVT 132          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.312e-14
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = -1
Query:  310 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 582
            + A IDW E+  +H+FK ++PG           EG +L I GE  KE++++N   H  ER +      +FLRR  LP+N KV+QVKA +ENGVLTV
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -1
Query:  307 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 618
            + PS A  R+    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K  R+ER  GKF+++F LP++A  +++ A  ++GVLTVT
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVT 140          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = -1
Query:  307 TNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSK----EQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 621
            T  P+ A  R+    A    D K+ P A+ F  D+PGL+         E R+L ISGER +    E++E++ K  R+ER  GKF+R+F LPDNA V+++ A  ++GVLTVT
Sbjct:   36 TGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVT 146          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = -1
Query:  307 DGFLSSALTNAP--SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 645
            DG   +   NAP  S  R+    A    D KE P ++VF+ D+PGL+         +  +L I GER +++E++  K  R+ER  GK +R+F LP+NA  + + A  ++GVL+VT
Sbjct:   25 DGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13
Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -1
Query:  307 SALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRH-RVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 630
            S+ ++APS     +    A    D KE P ++VF  D+PGL+            +L ISGER +E EEK   ++ R+ER  GK +R+F LP+NA  E++ A  ++GVLTVT
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVT 135          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.629e-13
Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = -1
Query:  307 RRTNVFDPFS----LDVWDPFDGFLSSALTNAPSSARETSQFANA-RIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 696
            +RT  +DPF     L  WDPF+      L N P  A      A     + +ET +A++FKADLPG+            R+  +SG+R +E+ E++++ +  ER+ G F R F LP+    + V+A ++NGVLT+T
Sbjct:   15 QRTREWDPFQQMQELMNWDPFE------LANHPWFANRQGPPAFVPAFEVRETKEAYIFKADLPGVDEKDIEVTLTGDRV-SVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLT 142          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = -1
Query:  307 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKND--KRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 600
            R+    A    D KE P ++VF AD+PG++         +  +L +SGER++ ++++ D  K  R+ER  GKF+R+F LP+NA VE + A  ++GVL VT
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVT 147          
BLAST of CN185997 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = -1
Query:  307 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKRHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 600
            R+    A    D KE   A+ F  D+PGL          + R+L ISGER +E+ E + K  R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   38 RDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 134          
The following BLAST results are available for this feature:
BLAST of CN185997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP22_MAIZE1.473e-1440.8017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_PEA5.599e-1438.6817.1 kDa class II heat shock protein OS=Pisum sati... [more]
HS157_ARATH7.312e-1443.7515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP21_HELAN1.247e-1337.7417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ1.247e-1341.4418.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP21_SOYBN2.128e-1336.5217.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_IPONI2.779e-1339.6417.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
SP21_STIAU3.629e-1334.81Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HSP22_IPONI8.085e-1339.0018.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP23_MAIZE1.801e-1243.8817.0 kDa class II heat shock protein OS=Zea mays G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185997 ID=CN185997; Name=CN185997; organism=Citrus sinensis; type=EST; length=765bp
TTTTTTTTTTTTTTTTCGCATTAAAAATATATTTTATTGCATCACACTTC
CATTTTTTAAAAAACTAGTTACAACGCTTGAGACTGGCTCCCGAAGCTCT
TGCAAACACACAAACATAATCACATCAAATTAAACAGGGGGGAAGGGAAG
CTCTTGCAAACACACACACACACACACAAGGGCTTTGCTTTCGTACCAAA
TTGAGGAGCAAACCAAAGACACAATCTTGAAAACATTTACACTTATCACT
TAGCCAGAGATCTCAATGGCCTTAACTTCAGGTTTCTTCTCCTCCTGTTT
AGGAACAGTCACTGTGAGCACACCATTCTCCATGCTGGCCTTAACCTGCT
CCACCTTAGCATTGTCGGGCAACCTGAACCTCCTCAGGAACTTGCCACTG
CTCCTCTCGACGCGATGCCGCTTGTCATTCTTCTCTTCCTGCTCCTTGCT
CCTCTCCCCGCTTATCTGCAGAATCCTGCCCTCTTCAACCTCAACTTTCA
CTTCTTCTTTCCTCAGCCCTGGAAGATCAGCCTTGAATACATGAGCCTGA
GGAGTCTCTTTCCAGTCAATTCTTGCATTGGCGAATTGGGATGTTTCCCT
AGCCGAAGACGGCGCGTTGGTAAGGGCAGAGGACAAGAACCCGTCGAAAG
GATCCCATACATCTAATGAAAATGGATCGAACACGTTGGTTCTTCGGCCA
CCGAAGATGCTTGGAATGAGTGACATTATGGCAAACTGGGGCGCTAATTA
AATGCTCAACAACTT
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