CN185996

Overview
NameCN185996
Unique NameCN185996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 52/80 (65.00%), Postives = 58/80 (72.50%), Query Frame = 3
Query:  507 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            YADEL+K A  I +PG+GILA DES  T GKRL SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK
Sbjct:   51 YADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGK 130          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 51/80 (63.75%), Postives = 59/80 (73.75%), Query Frame = 3
Query:  507 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            YADEL+K A  + +PG+GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK
Sbjct:   49 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGK 128          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21
Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = 3
Query:  507 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            YADEL+K A  I +PG GI+A DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK
Sbjct:   52 YADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGK 131          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.869e-21
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 3
Query:  501 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            G Y+DEL+K A  I +PG+GILA DES  T GKRL+SI ++N E NR+A R+LL  TPG   Y+SG ILFEETLYQ T  GK
Sbjct:   42 GAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGK 123          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: HUB1_CANGA (Ubiquitin-like modifier HUB1 OS=Candida glabrata GN=HUB1 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = -2
Query:  183 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 401
            MIEV++NDRLGKK+RVKC EDDT+GD KK+++ Q G +  KI +QK  ++ KDHITL DYE+HD   LELYYS
Sbjct:    1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDYEVHDNTNLELYYS 73          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.708e-20
Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 3
Query:  501 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            G YADEL+K A  I +PG+GILA DES  T GKRL SI +EN EANR+A R LL   P   +Y+SG ILFEETLYQ T  G+
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGR 82          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20
Identity = 49/82 (59.76%), Postives = 58/82 (70.73%), Query Frame = 3
Query:  501 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            G YADEL+K A  I +PG+GILA DES  T GKRL+SI +EN E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+
Sbjct:    7 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGR 88          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: HUB1_YEAST (Ubiquitin-like modifier HUB1 OS=Saccharomyces cerevisiae GN=HUB1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.446e-19
Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = -2
Query:  186 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 401
            MIEVV+NDRLGKKVRVKC  +D++GD KK+++ Q GT+ +KI +QK  ++ KDHI+L+DYE+HD   LELYY
Sbjct:    1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELYY 72          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: HUB1_KLULA (Ubiquitin-like modifier HUB1 OS=Kluyveromyces lactis GN=HUB1 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.446e-19
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = -2
Query:  186 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT-RADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 401
            MIEV++NDRLGKKV VKC  +DT+GD KK+++ Q GT  A KI +QK  ++ KDHITL+DYE+HDG  LELYY
Sbjct:    1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLEDYEVHDGTNLELYY 73          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.446e-19
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGK 746
            EL +NA+ I  PGKG+LAADEST TIGKR ++IN+EN E NRRA RELLF T P   +++SGVILF ET+YQKT  GK
Sbjct:   15 ELRENASAIVAPGKGLLAADESTNTIGKRFAAINLENTEENRRAYRELLFTTDPEFAKHISGVILFHETVYQKTKDGK 92          
The following BLAST results are available for this feature:
BLAST of CN185996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ALFC2_ARATH1.183e-2165.00Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC_SPIOL1.545e-2163.75Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC1_ARATH4.494e-2163.75Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC3_ARATH5.869e-2160.98Probable fructose-bisphosphate aldolase 3, chlorop... [more]
HUB1_CANGA7.666e-2163.01Ubiquitin-like modifier HUB1 OS=Candida glabrata G... [more]
ALFC2_PEA1.708e-2060.98Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC1_PEA3.804e-2059.76Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
HUB1_YEAST1.446e-1961.11Ubiquitin-like modifier HUB1 OS=Saccharomyces cere... [more]
HUB1_KLULA1.446e-1963.01Ubiquitin-like modifier HUB1 OS=Kluyveromyces lact... [more]
ALF_ECHMU1.446e-1965.38Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185996 ID=CN185996; Name=CN185996; organism=Citrus sinensis; type=EST; length=747bp
CGTCCCAGATATGTTACATAACCACAAATAAGTTTTTACAACTCTTCACA
AATTTTTTCTTACAAGACAGTATTAGTAAAGTTGGCCCTGCCGCATCTTC
CAATACCCCTTGCTTATTATGGCATATGGTTCCTAGTAGTATTGACTGCT
TGCAGCAGCATATATATTTAACGGTGGATTTAGCTGTAATAGAGTTCGAG
GCCCATGCCGTCGTGAATCTCGTAGTCCTTGAGAGTGATGTGGTCCTTGT
AGATGTTGTACCACTTCTGAATCCGAATCTTGTCGGCTCGAGTCCCGGTC
TGAGCCGCCACCAGCTTCTTCAAGTCGCCTATGGTGTCGTCTTCGTTGCA
CTTCACGCGCACCTTCTTCCCGAGCCTGTCGTTCAGCACCACCTCAATCA
TCTTTGTCTCCTGTTTTGATTTTCCCTGCCGAATGTCTGTTTCTCCCTCT
AACAAAACAAATTTTCTATCTTCAAGTAGATCACCATGTCTTGCTTCAAG
GGCAAATACGCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCC
TGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGC
GTCTATCCAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTC
CGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGT
CATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGC
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