CN185996

Overview
NameCN185996
Unique NameCN185996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19
Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  504 KYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGK 746
            K+ADELI  A  I  PGKGILAADEST TIG R   IN+EN E NRRA RELL  T  G  +++ G+IL+EETLYQK A G+
Sbjct:    4 KFADELIATAKAIVAPGKGILAADESTNTIGARFKKINLENNEENRRAYRELLIGTGNGVNEFIGGIILYEETLYQKMADGR 85          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: UBL5_DICDI (Ubiquitin-like protein 5 OS=Dictyostelium discoideum GN=ubl5 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.175e-19
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = -2
Query:  183 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKD--------------YEIHDGMGLELYYS 401
            MIEVV NDRLG KVRVK N DDTIGDLKK+++AQ G +A+KIR+QK Y+I+KD     +              YEIHDG GLELYY+
Sbjct:    1 MIEVVCNDRLGNKVRVKVNSDDTIGDLKKVLSAQIGIKAEKIRLQKSYSIFKDRNNNNNYNNYNNNNNNYYYYYEIHDGDGLELYYN 87          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.651e-18
Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 3
Query:  513 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGK 746
            DEL + A  I   GKGILAADESTGTIGKRL +IN+EN E NR+  R+LLF TP   Q++SGVIL+EET +Q T  G+
Sbjct:   18 DELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPNLNQHISGVILYEETFHQSTDKGE 95          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: HUB1_ASHGO (Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN=HUB1 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.074e-18
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = -2
Query:  186 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 401
            MIEV++NDRLGKK+RVKC   D++GDLKK++A Q GT   K+ + K     KDHI+L DYE+HDG  LELYY
Sbjct:    1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDYEVHDGTYLELYY 72          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.937e-17
Identity = 49/79 (62.03%), Postives = 57/79 (72.15%), Query Frame = 3
Query:  513 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGK 746
            DEL   A  I TPGKGILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GK
Sbjct:   14 DELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGK 92          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.771e-17
Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGK 746
            EL   A  I  PGKGILAADESTGT+GKR  +INVEN+E NRR  R++LF T  ++   + G+I F ETLYQK++ GK
Sbjct:   15 ELSDIAQRIVAPGKGILAADESTGTMGKRFQNINVENIEENRRCFRDILFSTDASIANCVGGIIFFHETLYQKSSNGK 92          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  513 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAG 743
            ++L + A  +  PGKGI+A DEST TI KR +S+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDG 80          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.954e-16
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAG 743
            EL + A  I + GKGILAADESTGT+GKRLS+I VENV+ NRR  R+LLF + P   + + GVI +EETLYQKT  G
Sbjct:   15 ELAEIAQRIVSNGKGILAADESTGTMGKRLSAIKVENVDENRRVYRQLLFSSDPSVTKAIGGVIFYEETLYQKTDDG 91          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.552e-16
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  513 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAG 743
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAG 80          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.552e-16
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  513 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAG 743
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAG 80          
The following BLAST results are available for this feature:
BLAST of CN185996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ALF_DICDI5.494e-1962.20Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
UBL5_DICDI7.175e-1957.47Ubiquitin-like protein 5 OS=Dictyostelium discoide... [more]
ALF2_CAEEL4.651e-1861.54Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
HUB1_ASHGO6.074e-1859.72Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN... [more]
ALF1_CAEEL3.937e-1762.03Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOB_SPAAU8.771e-1757.69Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALF1_XANAC1.145e-1654.55Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF2_LAMJA1.954e-1661.04Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALF1_XYLFT2.552e-1654.55Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA2.552e-1654.55Probable fructose-bisphosphate aldolase class 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185996 ID=CN185996; Name=CN185996; organism=Citrus sinensis; type=EST; length=747bp
CGTCCCAGATATGTTACATAACCACAAATAAGTTTTTACAACTCTTCACA
AATTTTTTCTTACAAGACAGTATTAGTAAAGTTGGCCCTGCCGCATCTTC
CAATACCCCTTGCTTATTATGGCATATGGTTCCTAGTAGTATTGACTGCT
TGCAGCAGCATATATATTTAACGGTGGATTTAGCTGTAATAGAGTTCGAG
GCCCATGCCGTCGTGAATCTCGTAGTCCTTGAGAGTGATGTGGTCCTTGT
AGATGTTGTACCACTTCTGAATCCGAATCTTGTCGGCTCGAGTCCCGGTC
TGAGCCGCCACCAGCTTCTTCAAGTCGCCTATGGTGTCGTCTTCGTTGCA
CTTCACGCGCACCTTCTTCCCGAGCCTGTCGTTCAGCACCACCTCAATCA
TCTTTGTCTCCTGTTTTGATTTTCCCTGCCGAATGTCTGTTTCTCCCTCT
AACAAAACAAATTTTCTATCTTCAAGTAGATCACCATGTCTTGCTTCAAG
GGCAAATACGCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCC
TGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGC
GTCTATCCAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTC
CGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGT
CATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGC
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