CN185996

Overview
NameCN185996
Unique NameCN185996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.449e-13
Identity = 44/78 (56.41%), Postives = 49/78 (62.82%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGK 746
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGR 92          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.449e-13
Identity = 44/78 (56.41%), Postives = 49/78 (62.82%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGK 746
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGR 92          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.449e-13
Identity = 44/78 (56.41%), Postives = 49/78 (62.82%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGK 746
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGR 92          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.504e-13
Identity = 43/77 (55.84%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDG 91          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.504e-13
Identity = 43/77 (55.84%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQ T  G
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDG 91          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.883e-13
Identity = 44/78 (56.41%), Postives = 49/78 (62.82%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGK 746
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGR 92          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.311e-12
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     + + + GVI F ETLYQK   G
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNG 91          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.311e-12
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     + + + GVI F ETLYQK   G
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNG 91          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.311e-12
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     + + + GVI F ETLYQK   G
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNG 91          
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.311e-12
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     + + + GVI F ETLYQK   G
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNG 91          
The following BLAST results are available for this feature:
BLAST of CN185996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ALDOA_PONAB3.449e-1356.41Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_MOUSE3.449e-1356.41Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN3.449e-1356.41Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOC_CARAU4.504e-1355.84Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE4.504e-1355.84Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOA_PANTR5.883e-1356.41Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOC_RAT1.311e-1254.55Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_PANTR1.311e-1254.55Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOC_MACFA1.311e-1254.55Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN1.311e-1254.55Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185996 ID=CN185996; Name=CN185996; organism=Citrus sinensis; type=EST; length=747bp
CGTCCCAGATATGTTACATAACCACAAATAAGTTTTTACAACTCTTCACA
AATTTTTTCTTACAAGACAGTATTAGTAAAGTTGGCCCTGCCGCATCTTC
CAATACCCCTTGCTTATTATGGCATATGGTTCCTAGTAGTATTGACTGCT
TGCAGCAGCATATATATTTAACGGTGGATTTAGCTGTAATAGAGTTCGAG
GCCCATGCCGTCGTGAATCTCGTAGTCCTTGAGAGTGATGTGGTCCTTGT
AGATGTTGTACCACTTCTGAATCCGAATCTTGTCGGCTCGAGTCCCGGTC
TGAGCCGCCACCAGCTTCTTCAAGTCGCCTATGGTGTCGTCTTCGTTGCA
CTTCACGCGCACCTTCTTCCCGAGCCTGTCGTTCAGCACCACCTCAATCA
TCTTTGTCTCCTGTTTTGATTTTCCCTGCCGAATGTCTGTTTCTCCCTCT
AACAAAACAAATTTTCTATCTTCAAGTAGATCACCATGTCTTGCTTCAAG
GGCAAATACGCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCC
TGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGC
GTCTATCCAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTC
CGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGT
CATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGC
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