CN185996

Overview
NameCN185996
Unique NameCN185996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:570..1317. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 41/77 (53.25%), Postives = 51/77 (66.23%), Query Frame = 3 
Query:  516 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAG 743
            EL + A  I +PGKGILAADES G++GKRL+ I VEN E NRR  R++LF     +   + GVI F ETLYQ +  G
Sbjct:   15 ELHEIALRIVSPGKGILAADESIGSMGKRLNQIGVENNEENRRLFRQVLFTADDRIDNCIGGVIFFHETLYQNSDDG 91
[Close]
BLAST of CN185996 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 3 
Query:  552 GKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAG 743
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSG 84
The following BLAST results are available for this feature:
BLAST of CN185996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ALDCA_DANRE1.712e-1253.25Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_ENCCU5.506e-1150.00Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185996 ID=CN185996; Name=CN185996; organism=Citrus sinensis; type=EST; length=747bp
CGTCCCAGATATGTTACATAACCACAAATAAGTTTTTACAACTCTTCACA
AATTTTTTCTTACAAGACAGTATTAGTAAAGTTGGCCCTGCCGCATCTTC
CAATACCCCTTGCTTATTATGGCATATGGTTCCTAGTAGTATTGACTGCT
TGCAGCAGCATATATATTTAACGGTGGATTTAGCTGTAATAGAGTTCGAG
GCCCATGCCGTCGTGAATCTCGTAGTCCTTGAGAGTGATGTGGTCCTTGT
AGATGTTGTACCACTTCTGAATCCGAATCTTGTCGGCTCGAGTCCCGGTC
TGAGCCGCCACCAGCTTCTTCAAGTCGCCTATGGTGTCGTCTTCGTTGCA
CTTCACGCGCACCTTCTTCCCGAGCCTGTCGTTCAGCACCACCTCAATCA
TCTTTGTCTCCTGTTTTGATTTTCCCTGCCGAATGTCTGTTTCTCCCTCT
AACAAAACAAATTTTCTATCTTCAAGTAGATCACCATGTCTTGCTTCAAG
GGCAAATACGCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCC
TGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGC
GTCTATCCAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTC
CGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGT
CATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGC
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