CN185995

Overview
NameCN185995
Unique NameCN185995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1617..2398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 73/154 (47.40%), Postives = 103/154 (66.88%), Query Frame = -1
Query:  329 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 784
            +DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  182 MDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.197e-31
Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = -1
Query:  329 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 784
            +DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  182 MDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.512e-30
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = -1
Query:  272 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 784
            +DG HDI++C +V E + A  +K + D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  206 LDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP-PVPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.579e-30
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = -1
Query:  329 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 784
            +DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  182 MDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.400e-30
Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = -1
Query:  407 HHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 703
            H++ LEGTLLKPNMVT G   PK  TP+ IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.802e-30
Identity = 71/154 (46.10%), Postives = 99/154 (64.29%), Query Frame = -1
Query:  329 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 784
            +DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  182 MDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 4.553e-27
Identity = 70/159 (44.03%), Postives = 99/159 (62.26%), Query Frame = -1
Query:  311 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 784
            +DG H I++   V ++V A  +  L +++VLLEG+ LKP+MV PG+  A K  P+ +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  228 LDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN185995 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.410e-22
Identity = 54/137 (39.42%), Postives = 81/137 (59.12%), Query Frame = -1
Query:  377 VDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 784
            ++G + + +  +VT ++L+   K LN   V + G L+K + VT G  +  K TP  +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  184 LEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN185995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_XYLFA1.786e-3147.40Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT5.197e-3146.75Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE1.512e-3044.19Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XANAC2.579e-3046.75Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_LYMST4.400e-3066.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF1_XANCP9.802e-3046.10Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL4.553e-2744.03Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_ENCCU4.410e-2239.42Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185995 ID=CN185995; Name=CN185995; organism=Citrus sinensis; type=EST; length=784bp
TTTTTTTTTTTTTTTATGTGACAAATCACAGAAATTTAGTGCCCCTTTGG
GAAAGGAAAAAAAAAGAAAAACAAAAACAAAAGCATCCTCTGTTTTCAGT
TTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTTATTGC
TCCACCTAAATATGAAAAAGCTCTAAAACTATGAATGAGAATGGGCCAAC
CTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACAACAC
CCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGAGACT
CTGCGGCACCTTCACCAAGCTGGGCATCACCCTTGTAAGTACCGAGGGTA
GCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTG
CACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGAAGTG
CACGTCCAAAGGAGAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGG
TTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCACCAGA
CAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGGGCCC
GGACAGTGTGTTCAGCAATCACGTCCGGTGTAACTTTGGGAGCTTCAGAT
CCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAGAAGGACATG
GTGGTCATTCAGAGCCTTGTAGCATGCAGCAAGAACACGCTCGGTCACAT
CAGCACACTTGTTGATGTCATGGGGACCGTCAAC
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