CN185989 | Citrus Genome Database

Overview


Name	CN185989
Unique Name	CN185989
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	764

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.814e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 8.814e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 111.694 bits (278), Expect = 4.537e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 111.694 bits (278), Expect = 4.537e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.564e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 2.564e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 1.320e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.011e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.011e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.011e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.011e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 4.374e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.011e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.713e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.713e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 108.997 bits (271), Expect = 2.941e-23
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.461e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 7.461e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.768 bits (273), Expect = 1.724e-23
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of CN185989 vs. ExPASy Swiss-Prot

BLAST of CN185989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	8.814e-36	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	1.964e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	2.564e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	4.374e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	4.374e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	4.374e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	4.374e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	4.374e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	5.713e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	7.461e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0002D01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN185989 ID=CN185989; Name=CN185989; organism=Citrus sinensis; type=EST; length=764bp
ATTCNGGACAGGAGGGAATCCCTCCTGATCAGCACATTTTTATTTTTGCT
GGAAAGCAGCTAGAAGATGGCCGTACCCTTGTTGACTACAACATTCAGAA
GGAATCTACCCTTCACTTGGTGCTTCGCCTTCGTGGTGGTATGCAAATCT
TTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG
GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCC
GCCTGACCAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAA
GGACCCTCGCCGACTACAATATTCAGAAGGAGTCCACTCTTCACTTGGTC
CTTCGCCTTCGTGGAGGTATGCAGATCTTTGTGAAGACTTTGACTGGGAA
GACCATCACTTTGGAGGTGGAAAGTTCAGACACCATAGATAATGTGAAGG
CCAAGATCCAAGATAAGGAGGGCATTCCTCCCGACCAGCAGAGGTTGATT
TTTGCTGGCAAGCAGCTTGAAGATGGTAGGACCCTTGCAGATTATAACAT
TCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGCCTTCGTGGTGGCATGC
AAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAG
AGTTCGGACACTATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGG
CATTCCACCAGACCAGCAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAG
ATGGGAGGACCCTT