CN185989 | Citrus Genome Database

Overview


Name	CN185989
Unique Name	CN185989
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	764

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 108.227 bits (269), Expect = 5.016e-23
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 108.227 bits (269), Expect = 5.016e-23
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.835e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 2.835e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.842 bits (268), Expect = 6.552e-23
Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.703e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 108.227 bits (269), Expect = 5.016e-23
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.1073 bits (196), Expect = 1.463e-14
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLR+RGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.836e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.836e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.118e-22
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.531 bits (262), Expect = 3.252e-22
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTL 56

HSP 4 Score: 80.1073 bits (196), Expect = 1.463e-14
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLE+GRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 106.686 bits (265), Expect = 1.460e-22
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 106.686 bits (265), Expect = 1.460e-22
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 6.316e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 106.686 bits (265), Expect = 1.460e-22
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CN185989 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.838e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  141 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 368
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 1.838e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  369 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 596
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.145 bits (261), Expect = 4.247e-22
Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 3

Query:  597 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 764
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

HSP 4 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 3

Query:    9 QEGIPPDQHIFIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 140
            +EGIPPDQ   IFAGKQLEDGRTL DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of CN185989 vs. ExPASy Swiss-Prot

BLAST of CN185989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	2.171e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	2.171e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	2.835e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	3.703e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	4.836e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	6.316e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	6.316e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	6.316e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	6.316e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	1.838e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0002D01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN185989 ID=CN185989; Name=CN185989; organism=Citrus sinensis; type=EST; length=764bp
ATTCNGGACAGGAGGGAATCCCTCCTGATCAGCACATTTTTATTTTTGCT
GGAAAGCAGCTAGAAGATGGCCGTACCCTTGTTGACTACAACATTCAGAA
GGAATCTACCCTTCACTTGGTGCTTCGCCTTCGTGGTGGTATGCAAATCT
TTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG
GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCC
GCCTGACCAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAA
GGACCCTCGCCGACTACAATATTCAGAAGGAGTCCACTCTTCACTTGGTC
CTTCGCCTTCGTGGAGGTATGCAGATCTTTGTGAAGACTTTGACTGGGAA
GACCATCACTTTGGAGGTGGAAAGTTCAGACACCATAGATAATGTGAAGG
CCAAGATCCAAGATAAGGAGGGCATTCCTCCCGACCAGCAGAGGTTGATT
TTTGCTGGCAAGCAGCTTGAAGATGGTAGGACCCTTGCAGATTATAACAT
TCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGCCTTCGTGGTGGCATGC
AAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAG
AGTTCGGACACTATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGG
CATTCCACCAGACCAGCAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAG
ATGGGAGGACCCTT