DC900119

Overview
NameDC900119
Unique NameDC900119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E FD RP  +   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  272 PSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRAP2 (S-adenosylmethionine synthetase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=metK PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK++VA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E+FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKISDSKIEKLVSETFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY+ R  AK++VA GL  +C VQV+YAIGV EP+SV VD+ GTGKI  K I +IV+E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  272 PSKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTAGTGKISSKRIAEIVREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +L+L+R     + + AAYGHFGR+D D  WE
Sbjct:  278 PTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGREDLDLPWE 381          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS +Y  R  AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D  I  +V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  271 PSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS +Y  R  AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D  I  +V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  271 PSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_ACIAC (S-adenosylmethionine synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK+IVA GLAR+C +QVSYAIGV  P++V V + GTG IPD++I  +V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  276 PTKVDRSAAYAARYVAKNIVAAGLARQCQIQVSYAIGVARPINVTVYTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK++VA GLAR+C VQVSYAIGV  P+++ V + GTG IPD++I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  270 PSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINITVYTEGTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 373          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_LEPCP (S-adenosylmethionine synthetase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/107 (57.01%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK+IVA GLAR+C +QV+YAIGV  P+++ V + GTG IPD EI K+V+  FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  276 PTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDAEIAKLVEAHFDLRPKGIIQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATW (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
The following BLAST results are available for this feature:
BLAST of DC900119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NEIM01.410e-2654.21S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_FRAP21.410e-2655.05S-adenosylmethionine synthetase OS=Francisella phi... [more]
METK_GEOMG1.842e-2657.94S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_ANATD1.842e-2656.07S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_ACIF51.842e-2657.01S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIF21.842e-2657.01S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIAC1.842e-2657.94S-adenosylmethionine synthetase OS=Acidovorax aven... [more]
METK_RALPJ2.405e-2656.07S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_LEPCP2.405e-2657.01S-adenosylmethionine synthetase OS=Leptothrix chol... [more]
METK_FRATW2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]

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Properties
Property NameValue
Genbank descriptionDC900119 VSS Citrus sinensis cDNA clone VS27V34 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900119 ID=DC900119; Name=DC900119; organism=Citrus sinensis; type=EST; length=696bp
CCCTACTAACGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTA
AGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCC
TATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGG
AACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCT
TTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGC
GGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGA
TGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGC
CTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAG
TTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTG
CTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCC
CATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGG
TTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTT
TGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGACT
ATTTTTGGAATGTAGAATGAANGCAGCAGCGAGTTGTATTAATTTG
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