DC900119

Overview
NameDC900119
Unique NameDC900119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATT (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATO (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATN (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATM (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATH (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRATF (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRAT1 (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRSGAY+ R  AK+IVA GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  269 PSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_DIAST (S-adenosylmethionine synthetase OS=Diaphorobacter sp. (strain TPSY) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK+IVA GLAR+C +QV+YAIGV  P+++ V + GTG IPD +I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  276 PTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQIAQLVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  271 PSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_BURPS (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei GN=metK PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  271 PSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374          
The following BLAST results are available for this feature:
BLAST of DC900119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_FRATT2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATO2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATN2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATM2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATH2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATF2.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRAT12.405e-2655.96S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_DIAST2.405e-2656.07S-adenosylmethionine synthetase OS=Diaphorobacter ... [more]
METK_BURTA2.405e-2656.07S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_BURPS2.405e-2656.07S-adenosylmethionine synthetase OS=Burkholderia ps... [more]

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Properties
Property NameValue
Genbank descriptionDC900119 VSS Citrus sinensis cDNA clone VS27V34 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900119 ID=DC900119; Name=DC900119; organism=Citrus sinensis; type=EST; length=696bp
CCCTACTAACGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTA
AGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCC
TATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGG
AACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCT
TTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGC
GGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGA
TGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGC
CTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAG
TTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTG
CTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCC
CATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGG
TTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTT
TGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGACT
ATTTTTGGAATGTAGAATGAANGCAGCAGCGAGTTGTATTAATTTG
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