DC900119

Overview
NameDC900119
Unique NameDC900119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  276 PTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  276 PTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_VEREI (S-adenosylmethionine synthetase OS=Verminephrobacter eiseniae (strain EF01-2) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK++VA GLAR+C +QV+YAIGV EP+++ V + GTG I D+ I  ++K+ FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  276 PTKVDRSAAYAARHVAKNVVAAGLARQCQIQVAYAIGVAEPMNITVYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_RICAH (S-adenosylmethionine synthetase OS=Rickettsia akari (strain Hartford) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 53/107 (49.53%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT +DRS AY+ R  AK++V  GLA RC +Q+SYAIGV  P+SV+ +++GT K+ +++I K++ + FD RPG +  +L L+      + KTA+YGHFGR+D DFTWE
Sbjct:  268 PTKIDRSAAYMARYIAKNVVGAGLADRCEIQISYAIGVAAPVSVYTETFGTSKLSNEQITKLITQHFDMRPGKIIKHLALR---TPCYQKTASYGHFGREDADFTWE 371          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_RALME (S-adenosylmethionine synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK++VA GLAR+C VQVSYAIGV  P++V V + GTGKI D++I  +V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  270 PSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINVTVYTEGTGKISDEKIAALVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK++VA GLAR+C VQVSYAIGV  P++V V + GTGKI D +I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  270 PSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINVTVYTEGTGKISDAKIAELVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA R  +Q+SYAIGV +P SV V ++GTGKI D++I ++V E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  270 PSKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHFDLRPKGIVQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 373          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            PT VDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+P+ ++++ V+++FD RP  +   LDLKR     + +TAAYGHFGR D    WE V
Sbjct:  281 PTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEPVSISIDTFGTGKVPESKLVEAVRDNFDLRPAGIIKMLDLKR---PIYKQTAAYGHFGRTDVALPWERV 386          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_RICPR (S-adenosylmethionine synthetase OS=Rickettsia prowazekii GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT +DRS AY+ R  AK+IV  GLA RC +Q+SYAIGV +P+SV+ +++GT K+ +++  K++ E FD RPG +  NL L       + KTA YGHFGR+D +FTWE
Sbjct:  268 PTKIDRSAAYMARYIAKNIVGAGLADRCEIQISYAIGVADPVSVYAETFGTSKLSNEQTTKLITEHFDMRPGKIIKNLKLH---TQCYQKTATYGHFGREDENFTWE 371          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_RHOFD (S-adenosylmethionine synthetase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLAR+C +QV+YAIGV +P++V V + GTG IPD +I ++V E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  276 PSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAKPMNVTVYTEGTGVIPDDKIAELVHELFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379          
The following BLAST results are available for this feature:
BLAST of DC900119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOPS1.194e-2554.21S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP11.194e-2554.21S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_VEREI1.559e-2554.21S-adenosylmethionine synthetase OS=Verminephrobact... [more]
METK_RICAH1.559e-2549.53S-adenosylmethionine synthetase OS=Rickettsia akar... [more]
METK_RALME1.559e-2556.07S-adenosylmethionine synthetase OS=Ralstonia metal... [more]
METK_RALEJ1.559e-2556.07S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_HERAR1.559e-2556.07S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_STACT2.036e-2552.29S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_RICPR2.036e-2550.47S-adenosylmethionine synthetase OS=Rickettsia prow... [more]
METK_RHOFD2.036e-2556.07S-adenosylmethionine synthetase OS=Rhodoferax ferr... [more]

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Properties
Property NameValue
Genbank descriptionDC900119 VSS Citrus sinensis cDNA clone VS27V34 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900119 ID=DC900119; Name=DC900119; organism=Citrus sinensis; type=EST; length=696bp
CCCTACTAACGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTA
AGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCC
TATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGG
AACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCT
TTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGC
GGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGA
TGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGC
CTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAG
TTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTG
CTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCC
CATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGG
TTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTT
TGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGACT
ATTTTTGGAATGTAGAATGAANGCAGCAGCGAGTTGTATTAATTTG
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