DC900119

Overview
NameDC900119
Unique NameDC900119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_MYXXD (S-adenosylmethionine synthetase OS=Myxococcus xanthus (strain DK 1622) GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 340
            P+ VDRS AY+ R  AK++VA GLARRC VQVSYAIGV EP+SV V+++GT  +P++ I   V+++F  RP  +T  L+L R     + KTAAYGHFGR + +FTWE V+  K
Sbjct:  266 PSKVDRSAAYMGRHIAKTVVAAGLARRCEVQVSYAIGVAEPVSVMVETFGTATVPEERIALAVRKTFGLRPREITEYLNLLR---PIYQKTAAYGHFGRTEKEFTWERVEEKK 375          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_MYXXA (S-adenosylmethionine synthetase OS=Myxococcus xanthus GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 340
            P+ VDRS AY+ R  AK++VA GLARRC VQVSYAIGV EP+SV V+++GT  +P++ I   V+++F  RP  +T  L+L R     + KTAAYGHFGR + +FTWE V+  K
Sbjct:  266 PSKVDRSAAYMGRHIAKTVVAAGLARRCEVQVSYAIGVAEPVSVMVETFGTATVPEERIALAVRKTFGLRPREITEYLNLLR---PIYQKTAAYGHFGRTEKEFTWERVEEKK 375          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_METPP (S-adenosylmethionine synthetase OS=Methylibium petroleiphilum (strain PM1) GN=metK PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK+IVA GLAR+C +QV+YAIGV  P+++ V + GTG IPD ++ ++V E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  276 PTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQLARLVAEHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 379          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_FRASN (S-adenosylmethionine synthetase OS=Frankia sp. (strain EAN1pec) GN=metK PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY +R  AK++VA GLA RC VQV+YAIG   P+ +FV+++GTGK+PD +I   V + FD RP  +  +LDL R     + +TAAYGHFGR + DFTWE
Sbjct:  281 PSKVDRSAAYAMRWVAKNVVAAGLASRCEVQVAYAIGKAHPVGLFVETFGTGKVPDAQIQDAVTQVFDLRPAAIVRDLDLLR---PIYAQTAAYGHFGRPELDFTWE 384          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA R ++QVSYAIGV +P SV V+++GTG++ D  I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  271 PSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAQPTSVMVNTFGTGRVSDATITRLVQEHFDLRPKGIIQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25
Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS +Y  R  AK+IVA GLA++C VQ++YAIGV  PL + +D++GTGKI D++I +IVK+ FD RP  +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  278 PTKVDRSASYAARYVAKNIVAAGLAKKCEVQLAYAIGVATPLEIGIDTFGTGKISDEKISEIVKQVFDLRPAAIIRDLDLRR---PIYRQVAAYGHFGRHDLDLPWE 381          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_THEEB (S-adenosylmethionine synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPG--MMTINL-DLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 322
            PT VDRS AY+ R  AK+IVA GLA +C +Q+SYAIGV  P+S+FVD++GTGK+  +++L+++K  FD RP   + T+NL  L +   GRF +  AAYGHFGR D D  WE
Sbjct:  287 PTKVDRSAAYMARYIAKNIVAAGLADKCELQISYAIGVARPMSLFVDTFGTGKLSPEQLLELIKTHFDLRPAAIIQTLNLRHLPQERGGRFYQDVAAYGHFGRHDLDLPWE 397          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_NITOC (S-adenosylmethionine synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK++VA GLA RC VQ+SYAIGV EP SV V+++GTG+I +  ++++++  FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  271 PSKVDRSAAYAGRYVAKNLVAAGLAERCEVQISYAIGVAEPTSVSVNTFGTGRIAESRLVELIQAHFDLRPVGLLQMLDLIR---PIYRKTAAYGHFGREEPEFTWE 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25
Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 2
Query:    5 TNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            + VDRSGAY+ R  AK++VA+GLA +C VQ++Y IGV EP+SV V S GT  +PD+ + + V+E FD RP  +T  LDL R   G   KT+ YGHFGR+ P+FTWE
Sbjct:  275 SKVDRSGAYMARYIAKNVVASGLAPKCEVQIAYCIGVAEPVSVLVSSQGTASVPDEVLTRAVREVFDLRPFHITRRLDLLRPIYG---KTSCYGHFGRELPEFTWE 377          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25
Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 2
Query:    5 TNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            + VDRSGAY+ R  AK++VA+GLA +C VQ++Y IGV EP+SV V S GT  +PD+ + + V+E FD RP  +T  LDL R   G   KT+ YGHFGR+ P+FTWE
Sbjct:  275 SKVDRSGAYMARYIAKNVVASGLAPKCEVQIAYCIGVAEPVSVLVSSQGTASVPDEVLTRAVREVFDLRPFHITRRLDLLRPIYG---KTSCYGHFGRELPEFTWE 377          
The following BLAST results are available for this feature:
BLAST of DC900119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MYXXD2.036e-2553.10S-adenosylmethionine synthetase OS=Myxococcus xant... [more]
METK_MYXXA2.036e-2553.10S-adenosylmethionine synthetase OS=Myxococcus xant... [more]
METK_METPP2.659e-2554.21S-adenosylmethionine synthetase OS=Methylibium pet... [more]
METK_FRASN2.659e-2553.27S-adenosylmethionine synthetase OS=Frankia sp. (st... [more]
METK_BURP82.659e-2554.21S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_THEP33.473e-2553.27S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_THEEB3.473e-2553.15S-adenosylmethionine synthetase OS=Thermosynechoco... [more]
METK_NITOC3.473e-2553.27S-adenosylmethionine synthetase OS=Nitrosococcus o... [more]
METK_DESVV3.473e-2553.77S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH3.473e-2553.77S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]

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Properties
Property NameValue
Genbank descriptionDC900119 VSS Citrus sinensis cDNA clone VS27V34 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900119 ID=DC900119; Name=DC900119; organism=Citrus sinensis; type=EST; length=696bp
CCCTACTAACGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTA
AGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCC
TATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGG
AACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCT
TTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGC
GGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGA
TGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGC
CTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAG
TTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTG
CTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCC
CATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGG
TTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTT
TGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGACT
ATTTTTGGAATGTAGAATGAANGCAGCAGCGAGTTGTATTAATTTG
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