DC900119

Overview
NameDC900119
Unique NameDC900119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_NITSB (S-adenosylmethionine synthetase OS=Nitratiruptor sp. (strain SB155-2) GN=metK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRSGAY  R  AK++VA+G   +  VQ++YAIGV EP+S+ VDS+GT K+PD+++   V++ FD  P  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  268 PTKVDRSGAYAARYVAKNLVASGACEKATVQIAYAIGVVEPVSIMVDSHGTAKVPDEKLEACVRDLFDLTPRGIIKTLDLLR---PIYRKTAAYGHFGRELPEFTWE 371          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA +C +Q+SYAIGV EP S+ ++++GTGK+ D  I ++V+E F+ RP  +   LDLKR     +L TAAYGHFGR+  +FTWE
Sbjct:  270 PSKVDRSAAYAGRYVAKNIVAAGLADKCEIQISYAIGVAEPTSISINTFGTGKVSDAVISQLVREHFELRPAGLIKMLDLKR---PIYLPTAAYGHFGREGENFTWE 373          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA R  +Q+SYAIGV +P SV V ++GTGKI D++I ++V E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  270 PSKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHFDLRPKGIVQMLDLLR---PIYQKTAAYGHFGREEPEFSWE 373          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEV 325
            P+ VDRSGAY+ R  AK++VA+G  +RC VQ++Y IGV EPLSV V S G+  IPD+ + K V+E FD RP  ++  LDLKR     +  T+ YGHFGR+   FTWEV
Sbjct:  272 PSKVDRSGAYMARYVAKNMVASGACKRCEVQIAYCIGVAEPLSVLVTSMGSSDIPDEALTKAVREVFDLRPYYISKRLDLKR---PIYKPTSCYGHFGREQAGFTWEV 376          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_CYAP8 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 8801) GN=metK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPG--MMTINL-DLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 322
            PT VDRS AY  R  AK+IVA GLA +C VQVSYAIGV  P+S+ V+++GTGK+ + ++LK+V+E F+ RP   + T+NL +L     GRF +  AAYGHFGR D D  WE
Sbjct:  289 PTKVDRSAAYACRYVAKNIVAAGLADKCEVQVSYAIGVARPVSILVETFGTGKVDEDKLLKVVQELFELRPAGILQTLNLRELPSQRGGRFYQDVAAYGHFGRTDLDLPWE 399          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS  Y+ R  AK+IVA+G+A R +VQ +YAIGVPEPLSV+V+++GT K+ D+ +  IV +  D  P  +   LDL+R     + KT AYGHFGR+ P+FTWE
Sbjct:  279 PTKVDRSACYMARYVAKNIVASGIADRALVQFAYAIGVPEPLSVYVNTFGTAKVHDEVLANIVSKELDLTPAGIIKRLDLRR---PIYEKTTAYGHFGRELPEFTWE 382          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_TREDE (S-adenosylmethionine synthetase OS=Treponema denticola GN=metK PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY+ R  AK++VA  LARRC VQ++YAIGVP P++V VD++GTG++P+++I K +KE FD  P  +   LDLKR     + +TAAYGHFGR  P+F+WE
Sbjct:  275 PSKVDRSAAYMARYIAKNVVAADLARRCEVQLAYAIGVPFPVAVRVDTFGTGEVPEEKIEKAIKEVFDMSPAGIIKTLDLKR---PIYKETAAYGHFGR--PEFSWE 376          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS +Y  R  AK+IVA GLA++C VQV+YAIGV  PL V ++++GTGKI D++I +IVK+ FD RP  +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  278 PTKVDRSASYAARYVAKNIVAAGLAKKCEVQVAYAIGVATPLEVEINTFGTGKISDEKISEIVKKVFDLRPAAIIRDLDLRR---PIYRQVAAYGHFGRHDLDLPWE 381          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_METCA (S-adenosylmethionine synthetase OS=Methylococcus capsulatus GN=metK PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY+ R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GTG+I ++ ++K+V+E FD RP  +   LDL R     +  TAAYGHFGR +  FTWE
Sbjct:  269 PSKVDRSAAYMGRYVAKNIVAAGLAERCEIQVSYAIGVAEPTSISIETFGTGRIAEETLVKLVREHFDLRPKGLITMLDLLR---PIYRPTAAYGHFGRTEGTFTWE 372          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDP----DFTWEVVKPL 337
            P+ VDRS AY  R  AKSIVA GLARRC+VQ++YAIGV EPLS+ V++YGTGK  D ++L+IVK++F  RP  +   L+L+R     +  T+ +GHFGR D      FTWEV K +
Sbjct:  278 PSKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNFKLRPYDIIQELNLRR---PIYYDTSRFGHFGRKDELGTGGFTWEVPKKM 390          
The following BLAST results are available for this feature:
BLAST of DC900119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NITSB4.536e-2552.34S-adenosylmethionine synthetase OS=Nitratiruptor s... [more]
METK_MARMS4.536e-2553.27S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_JANMA4.536e-2555.14S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_DESMR4.536e-2552.78S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_CYAP84.536e-2554.05S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_BRAHW4.536e-2552.34S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_TREDE5.925e-2554.21S-adenosylmethionine synthetase OS=Treponema denti... [more]
METK_THETN5.925e-2554.21S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_METCA5.925e-2553.27S-adenosylmethionine synthetase OS=Methylococcus c... [more]
METK_LEIIN5.925e-2552.59S-adenosylmethionine synthetase OS=Leishmania infa... [more]

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Properties
Property NameValue
Genbank descriptionDC900119 VSS Citrus sinensis cDNA clone VS27V34 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900119 ID=DC900119; Name=DC900119; organism=Citrus sinensis; type=EST; length=696bp
CCCTACTAACGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTA
AGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCC
TATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGG
AACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCT
TTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGC
GGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGA
TGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGC
CTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAG
TTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTG
CTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCC
CATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGG
TTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTT
TGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGACT
ATTTTTGGAATGTAGAATGAANGCAGCAGCGAGTTGTATTAATTTG
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