DC900119

Overview
NameDC900119
Unique NameDC900119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1069..1764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 50/109 (45.87%), Postives = 76/109 (69.72%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 328
            P+ VDRS AY +R  AK+IVA+GLA RC +Q+SYAIGV  P+S+F++++GT KI +K+++ ++ E+FD RP  + + LDL +     + +TA YGHF +    F WE +
Sbjct:  268 PSKVDRSAAYALRYVAKNIVASGLADRCEIQISYAIGVSNPISIFIETFGTQKISNKKLINLIHENFDLRPHGLIVMLDLLK---PIYRETAVYGHFSK--IHFPWEKI 371          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRS  Y  R  AK++VA+ LA RC VQ++YAIGV +P+ V V+++GTG++ +  + K + ++FD RP  +   LDL +     + KTAAYGHFGRD  +FTWE
Sbjct:  270 PTKVDRSACYYARYVAKNVVASKLAARCEVQIAYAIGVAQPVGVHVNTFGTGRVGEDVLEKYIMQNFDMRPKAIIEQLDLLK---PIYRKTAAYGHFGRD--EFTWE 371          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  268 PSKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP +++  +V+E FD RP  +   +DL +     + +TAAYGHFGR+   F WE
Sbjct:  268 PSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTEQLTLLVREFFDLRPYGLIQMMDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_OENOB (S-adenosylmethionine synthetase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 2
Query:    5 TNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            T VDRSGAY  R  AK++VA GLA +  +QV YAIGV  P+S+ +D++GT K+   +I  IV + FDFRP  +   LDL+R     +L+TAA+GHFGR D D  WE
Sbjct:  272 TKVDRSGAYYARYVAKNLVAAGLADKLEIQVGYAIGVARPVSIDLDTFGTEKVSIDKIYSIVDQVFDFRPLSIINQLDLRR---PIYLQTAAFGHFGRSDLDLPWE 374          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_MYCPA (S-adenosylmethionine synthetase OS=Mycobacterium paratuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY +R  AK+IVA GLA R  VQV+YAIG   P+ +FV+++GT  +   +I KIV E FD RPG +  +LDL R     + +TAAYGHFGR D +  WE
Sbjct:  288 PSKVDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFVETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLR---PIYAQTAAYGHFGRTDVELPWE 391          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            PT VDRSGAY  R  AK+IVA GLA++  VQ++YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  282 PTKVDRSGAYAARYVAKNIVAAGLAKKVEVQLAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 53/107 (49.53%), Postives = 73/107 (68.22%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK++VA+G+  + IVQV+YAIGV EP+S+ VD+ GTGK+ D ++ + VK  F   P  +  +LDL R     + KTAAYGHFGR+  +F+WE
Sbjct:  268 PSKVDRSAAYAARYVAKNLVASGVCDKAIVQVAYAIGVVEPVSILVDTQGTGKVEDSKLTECVKAVFRLTPKGIIESLDLLR---PIYRKTAAYGHFGRELNEFSWE 371          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_ENT38 (S-adenosylmethionine synthetase OS=Enterobacter sp. (strain 638) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  268 PSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKLPTEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of DC900119 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 2
Query:    2 PTNVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 322
            P+ VDRSGAY+ R  AK++VA GLA +C VQ++Y IGV +P+SV   S G+  I D+ + + V++ FD RP  ++  LDL+R     + K+A YGHFGR+ P+F+WE
Sbjct:  274 PSKVDRSGAYMGRYIAKNVVAAGLAPKCEVQIAYCIGVADPVSVLCTSLGSSDISDEVLTQAVRDVFDLRPYHISKRLDLRR---PIYKKSACYGHFGREIPEFSWE 377          
The following BLAST results are available for this feature:
BLAST of DC900119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_WIGBR1.046e-2145.87S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_SORC51.046e-2148.60S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_SODGM1.046e-2151.40S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SERP51.046e-2151.40S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_OENOB1.046e-2150.94S-adenosylmethionine synthetase OS=Oenococcus oeni... [more]
METK_MYCPA1.046e-2151.40S-adenosylmethionine synthetase OS=Mycobacterium p... [more]
METK_LISW61.046e-2149.53S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_HELHP1.046e-2149.53S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_ENT381.046e-2151.40S-adenosylmethionine synthetase OS=Enterobacter sp... [more]
METK_DESDG1.046e-2147.66S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]

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Properties
Property NameValue
Genbank descriptionDC900119 VSS Citrus sinensis cDNA clone VS27V34 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900119 ID=DC900119; Name=DC900119; organism=Citrus sinensis; type=EST; length=696bp
CCCTACTAACGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTA
AGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCC
TATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGG
AACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCT
TTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGC
GGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGA
TGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGC
CTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAG
TTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTG
CTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCC
CATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGG
TTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTT
TGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGACT
ATTTTTGGAATGTAGAATGAANGCAGCAGCGAGTTGTATTAATTTG
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