DC900118

Overview
NameDC900118
Unique NameDC900118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:56..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 8.594e-65
Identity = 122/249 (49.00%), Postives = 171/249 (68.67%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMA-LAEEEFTWFLDKDATSKL 902
            ++V ++ E+L++ L  Y A++S    KE G+F +VLSGGSLI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LS+V +   ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P+FDL+LLGMG DGH+ASLFP HP L+  + WVTF+ DS KPPPERITFT PVINS+A + +V  G  K++A+  A+ +     +S  LP ++   +     WF+DK A SKL
Sbjct:   13 IRVHENLEELSIDLVDYIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKL 261          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.159e-63
Identity = 119/260 (45.77%), Postives = 170/260 (65.38%), Query Frame = 3
Query:  135 MAAENXXKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAL-AEEEFTWFLDKDATSKL 902
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 6.159e-63
Identity = 119/260 (45.77%), Postives = 170/260 (65.38%), Query Frame = 3
Query:  135 MAAENXXKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAL-AEEEFTWFLDKDATSKL 902
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.632e-39
Identity = 97/248 (39.11%), Postives = 138/248 (55.65%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 902
            + VF S ++L  SLA+  A  +A      +G F + LSGGSL+  L + +      +    +A+W + + DER+VP DH +S Y L     LS++PI    V  I+ AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFPGHPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L  +Q S L    +        WFLD+ A   L
Sbjct:    9 ISVFSSPQELGASLAQLVAQRAASCLEGNRGRFALGLSGGSLVSMLARDLPAATAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLKRIL-EDQESALPAAMVQPRTGALCWFLDEAAARLL 247          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.632e-39
Identity = 97/249 (38.96%), Postives = 139/249 (55.82%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEE-EFTWFLDKDATSKL 902
            + VF S ++L  SLA+  A  +A     ++G F + LSGGSL+  L + +      +    +A+W + + DER+VP DH +S Y L     LS++PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  I  V  G GK++ ++  L + + +  LP  +         WFLD+ A   L
Sbjct:    9 ISVFSSPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGT--LPAALVQPRTGALCWFLDEAAARLL 247          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.058e-38
Identity = 94/248 (37.90%), Postives = 139/248 (56.05%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGS-FTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 902
            + VF S ++L  SLA+     +A    + G+ FT+ LSGGSL+  L + +      +     A+W + + DER+VP +H +S Y L     LS++PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +  +  +  WFLD+ A   L
Sbjct:    9 ISVFSSPQELGASLAQLVVQQAACCLADAGARFTLGLSGGSLVSMLARELPAAAAPAGPASLARWTLGFCDERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILKRILEDKEENPLPAALVQPSAGKLCWFLDEAAARLL 248          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 4.020e-38
Identity = 95/250 (38.00%), Postives = 137/250 (54.80%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRK----LVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 902
            + VF S ++L  +LA+  A  +A      +  F + LSGGSL+  L +     V P    S+  A+W + + DER+VP DH +S Y L     LS++PI    V  IN  L  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +     +  WFLD+ A   L
Sbjct:    9 ISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPAAVAPAGPASL--ARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLL 248          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.210e-34
Identity = 90/250 (36.00%), Postives = 130/250 (52.00%), Query Frame = 3
Query:  159 NKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 902
            + ++++F   + L  +  K            +G   +VL+GG    +L + +       IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A+  +   W LD+DA +KL
Sbjct:    2 SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ-AQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.210e-34
Identity = 90/250 (36.00%), Postives = 130/250 (52.00%), Query Frame = 3
Query:  159 NKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 902
            + ++++F   + L  +  K            +G   +VL+GG    +L + +       IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A+  +   W LD+DA +KL
Sbjct:    2 SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ-AQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.981e-33
Identity = 94/258 (36.43%), Postives = 132/258 (51.16%), Query Frame = 3
Query:  165 NVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNY----KLAYDGFLSQVPITTGNVYAINDALSAEG------AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEE--EFTWFLDKDATSKL 902
            +V  F     +A +L  +  + S    K  G FT+ LSGGSL   L + +       IE++KW VF+ DER+VP D ++SNY    KL +D F    P     ++ IN  L  E        A++YE  L H     + A S+    P FDL+LLG GPDGH  SLFP H +L+E+  WV  + DSPKPP +RIT T PV+  +  IA V  GAGK   +   +     +  LP  +         +WF+D +A++ L
Sbjct:    2 SVYSFSDVSLVAKALGAFVKEKSEASIKRHGVFTLALSGGSLPKVLAEGLAQQR--GIEFSKWEVFFADERIVPLDDENSNYALCKKLIFDKFEGFDP---KKIHTINPELLKENPIDPQNVADEYEKQLVH-----VFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVI--EDFTSKLPSALITRNNLTRTSWFVDDEASANL 247          
The following BLAST results are available for this feature:
BLAST of DC900118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
6PGL1_ARATH8.594e-6549.00Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL1_ORYSJ6.159e-6345.77Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI6.159e-6345.77Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL_RAT1.632e-3939.116-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_MOUSE1.632e-3938.966-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_BOVIN1.058e-3837.906-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN4.020e-3838.006-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_MYCTU1.210e-3436.006-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO1.210e-3436.006-phosphogluconolactonase OS=Mycobacterium bovis G... [more]
6PGL_SCHPO2.981e-3336.43Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]

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Properties
Property NameValue
Genbank descriptionDC900118 VSS Citrus sinensis cDNA clone VS27V33 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900118 ID=DC900118; Name=DC900118; organism=Citrus sinensis; type=EST; length=1051bp
CTCGTGCCGCATTCGGCACGAGTCAGTTTCAGTTTCAGTTACTCAGAAGA
CCAAACTCACTCCTCCAATTTCGAAACATTTCCCTTGATCGGAACAAATC
ATCGGACTGCGTGAGAATCAAGGCATCATCATCAATGGCTGCCGAGAATA
ANANCAAGAACAAGAACGTACAAGTTTTTGACTCAGAGGAAGATCTGGCT
GTGTCTTTGGCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGA
GAAGGGCTCCTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCC
TCAGGAAATTAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAA
TGGCATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGA
TAGCAATTATAAGCTTGCTTATGATGGTTTCCTTTCTCAGGTACCAATTA
CCACTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCA
GCTGAAGATTACGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATT
AGCTACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGG
GTATGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTT
CTCAAGGAGAATGAGAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCC
ACCTCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCAT
ATATTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACT
GCATTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATT
GGCTGAAGAAGAATTCACTTGGTTTCTTGACAAAGACGCNACTTCAAAGC
TGTAAGAGTCAGAACAATTTGCTGTATGCATGAATCCCTGTTATCTGCTA
TGATAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTT
GTTAGTAATGAGAACAGAGTGAACTTGTTAATGGAAGTGAAAAAGATTTA
A
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