CN185984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: ACSF2_HUMAN (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = -2 Query: 205 TIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLR 663 T GE+ + G VM GY P+ EE + WY TGD+ + + +I RSKD+II GGENI E+E+ + HP V E VV D+R GE CA + L K E+ E+I C+ K+ + +PK IVF P T +GKIQK LR Sbjct: 457 TPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRL-----KDGEETTVEEIKAFCKGKISHFKIPKYIVFVTNYPLTISGKIQKFKLR 606
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: ACSF2_RAT (Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23 Identity = 63/158 (39.87%), Postives = 85/158 (53.80%), Query Frame = -2 Query: 190 GEIVMSGNVVMKGYLKNPKANEETFANG-WYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKPKE 657 GE+ + G VM+GY P+ ET WY TGD+ + I RSKD+II GGENI E+E+ + HP V EA VV D+R GE CA + L KS E E+I C+ K+ + +P+ IVF P T +GKIQK LR + ++ Sbjct: 459 GELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRL-----KSGETTTEEEIKAFCKGKISHFKIPRYIVFVEGYPLTVSGKIQKFKLREQMEQ 611
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: FADK_ECOLI (Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadK PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.036e-22 Identity = 64/153 (41.83%), Postives = 84/153 (54.90%), Query Frame = -2 Query: 205 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 657 GE G V GY P+ GWY++GDL YI+I R KDII+ GGENISS EVE+++ HP + +A VVA +DER GE CA+V LK + L E + R ++ Y P+ I V LP+T +GKIQK +LR Sbjct: 383 GEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKA---PHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLR 532
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: MENE_OCEIH (2-succinylbenzoate--CoA ligase OS=Oceanobacillus iheyensis GN=menE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = -2 Query: 208 IGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVL 660 IGEI++ G +V KGY K + N+E F N W HTGD+G Y+ + DR D+IISGGENI E+EN++ + EA V +E WG P AF+ + +E ++A + K + Y PK I V LP+ A K+ +H L Sbjct: 334 IGEILVKGPMVTKGYYKRAETNKEVFENNWLHTGDMGYLDEQGYLYVVDRRNDLIISGGENIYPSEIENVLVQIEGIEEAGVKGSPNEEWGMVPIAFIVCSRPI---SENEIAAHLEKY----LAKYKRPKEIHVVNELPRNAANKLVRHNL 478
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: ALKK_PSEOL (Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = -2 Query: 199 VPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAK 681 +P DG++ G ++ G+ V+K Y + + T ++GW+ TGD+ D ++ I DR+KDII SGGE IS+VE+E++ HP +++A+V+A E+W E P P N + + ++ K+ + +P + +F LP+ TGKI K+ LR K Sbjct: 378 LPEDGRSKGNLMARGHWVIKDYFHSDPGS--TLSDGWFSTGDVATIDSDGFMTICDRAKDIIKSGGEWISTVELESIAIAHPHIVDAAVIAARHEKWDERPLLIAVKSP-----NSELTSGEVCNYFADKVARWQIPDAAIFVEELPRNGTGKILKNRLREK 532
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: MENE_ENTFA (2-succinylbenzoate--CoA ligase OS=Enterococcus faecalis GN=menE PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 59/165 (35.76%), Postives = 88/165 (53.33%), Query Frame = -2 Query: 175 KTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKPKEMGPVR 666 K +GEI++ G V+ GYL N + E+ A+GW+ TGD+G +Y+ + R ++IISGGENI EVE ++ + A+VV D +WG P A+V S+++ I C K+ Y PK I F P+TA+GKI KH + +E +R Sbjct: 329 KQVGEILLKGPNVVSGYL-NQRQPEKWTADGWFKTGDMGYLDAQSYLYLVSRLSELIISGGENIYPTEVEQVLQAITGIKAAAVVGEPDAQWGAVPVAYVI-------SDQEITLAQIQDQCSRKLAKYKRPKRIYFCHSFPQTASGKIAKHRFMTEEREAFLIR 485
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 61/157 (38.85%), Postives = 81/157 (51.59%), Query Frame = -2 Query: 190 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKPKE 657 GEI++ G VMKGY P+ +GW TGD+G + + I DR KDIII+GG NI EVE +Y H A+ E V D GE+ AFV L K + E++ R+++ Y VPK+ F LPKTA GKI + L + E Sbjct: 404 GEIIVKGPQVMKGYWNKPEETAAVLRDGWLFTGDMGYMDEEGFFYIADRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFVVL-----KKGAKADTEELDAFARSRLAPYKVPKAYEFRKELPKTAVGKILRRRLLEEETE 555
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20 Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = -2 Query: 199 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYW--VPKSIVFGPLPKTATGKIQKHVLRAK 657 GEI + G+ +MKGYL NP A ET +GW HTGD+G+ D+ + I DR K++I G ++ E+E ++ HP + + +VVA +E GE P AFV KS + +L+ED +K +K ++ + K +PK +GKI + LRAK Sbjct: 407 GEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVV------KSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAK 556
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = -2 Query: 205 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLR 657 GE+ + G VM GY + P A +E NGW HTGD+ V + ++ I DR KD+I+ G N+ E+E+++ HP V E + V GE+ FV K + E ++ CR ++ Y VPK + F LPK+ GKI + LR Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVV------KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELR 550
BLAST of CN185984 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = -2 Query: 205 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLR 657 GE+ + G VM GY + P A +E NGW HTGD+ V + ++ I DR KD+I+ G N+ E+E+++ HP V E + V GE+ FV K + E ++ CR ++ Y VPK + F LPK+ GKI + LR Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVV------KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELR 550 The following BLAST results are available for this feature:
BLAST of CN185984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185984 ID=CN185984; Name=CN185984; organism=Citrus sinensis; type=EST; length=682bpback to top |