EG358210

Overview
NameEG358210
Unique NameEG358210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6867 contig Csv1_Contig6867:22..462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKL----EDTETSNNASFQ 202
            ++ RFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L    +D + S N S Q
Sbjct:   47 DITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPKGDDKDPSKNNSCQ 116          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.943e-11
Identity = 38/110 (34.55%), Postives = 56/110 (50.91%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVP--KYAALLEFFVPLLVAGSYFAYRYL 328
            ++ RF+ EHPGGEEVL++  GKDAT+ FE+IGHS  A E+L  Y +G L                +  + KE    V++   +P  K  + L   +P L       Y+Y+
Sbjct:   30 DITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSLD---------------EASRTKEYNVNVIRAGELPEEKKGSSLRIILPALAIIGALVYKYV 124          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.943e-11
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLE----DTETSNNASFQ 202
            ++ RFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L+    D + S N S Q
Sbjct:   47 DITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQ 116          
BLAST of EG358210 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.432e-11
Identity = 32/100 (32.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    5 NVARFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 304
            +V  F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T          + +   F++K         +L+F VP+L+ G
Sbjct:   32 DVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIGEIDSSTVPATRTYVAPVQPAYNQDKTPEFMIK---------ILQFLVPILILG 122          
The following BLAST results are available for this feature:
BLAST of EG358210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CYB5B_MOUSE3.785e-1148.57Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]
CYB5_RHIST4.943e-1134.55Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]
CYB5B_RAT4.943e-1148.57Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB5_BRAOB8.432e-1132.00Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]

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Properties
Property NameValue
Genbank description1g7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001g7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358210 ID=EG358210; Name=EG358210; organism=Citrus sinensis; type=EST; length=441bp
ACTGAACGTTGCAAGGTTCCTGGAAGAACACCCAGGAGGAGAGGAAGTGC
TGATGGAGGCGGCAGGGAAGGATGCAACAAAGCAGTTTGAGGAAATTGGA
CACAGCAAGGCTGCTCACGAGTTGCTCTTCAACTACCGGGTGGGTGTTCT
TCAAGGTTACAAGTTAGAAGACACAGAAACATCCAATAATGCTTCATTCC
AGGAGCCCAAAAAGAAAGAGATGGAGGCTTTTGTCGTCAAGGATAATGGC
GTGCCTAAATATGCAGCTCTTCTCGAGTTCTTTGTGCCACTCTTGGTTGC
TGGTTCCTACTTTGCTTACAGGTATCTGGCCTGAGCCCAGAACATCCTTG
ACTGGATCATCCGCTTCCTCTTATATGTCTGCTTGATGAATTGCTGCAAG
TCTCGCTGTCAGTAGGCAAGGCAACGAATGATTTAACCATG
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