DC900116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_PSESM (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas syringae pv. tomato GN=pckA PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.870e-73 Identity = 144/273 (52.75%), Postives = 177/273 (64.84%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTE----DGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 871 D +RYLIGDDEH WG V NIEGGCYAKCIDLS + EP IW AI+ GAVLENVV D T+ DY+D S+T+N+RAAYP E I +G P VI L CD GVLPPVS L+ Q YHF+SGYTALV TE GIK +TFS CFGA F +YA +L ++++ + +LVNTGW+GG YG G R +P TR +I AI SG+L+ A + D +++P V GV + +L+P NTWADK AY E LAGLF NF+ F Sbjct: 232 DESRYLIGDDEHGWGVGVVFNIEGGCYAKCIDLSEKNEPVIWKAIQHGAVLENVVLDPVTKTADYADSSLTQNSRAAYPRELIEKRAPKNLGGEPNAVIFLTCDLTGVLPPVSILSEEQAAYHFLSGYTALVGSTEMGSGSGIK---STFSTCFGAPFFPRPAGEYAELLIKRIRGFKSKVYLVNTGWTGGGYGVGKRFNIPTTRGVIAAIQSGALIGAETEHLDTINLDVPKLVPGVDTGLLNPRNTWADKAAYDEAAKALAGLFVENFKKF 501
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_NOVAD (Phosphoenolpyruvate carboxykinase [ATP] OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=pckA PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.870e-73 Identity = 140/275 (50.91%), Postives = 180/275 (65.45%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGG--SYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 880 D +R LIGDDEH W D V N EGGCYAK I LS E EP+I+ K FG VLENVV D TR +D D S+ EN+R +YPI++IPNA +GP P N+I L DA+GVLPP+++L Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+ HP+ Y +L E++ K G WLVNTGWSGG + R+ + TR +++A GSL +A + K FG E+P EV GV +++LDP WAD + Y +T +L F NF+ F ++ Sbjct: 247 DASRTLIGDDEHGWSDTAVFNFEGGCYAKMIRLSAEAEPEIFATTKRFGTVLENVVIDPVTRTIDLDDNSLAENSRGSYPIDFIPNASEENLGPVPANLIFLTADAYGVLPPIARLTPDQAMYHFLSGYTARVAGTEIGVTEPEATFSTCFGAPFMPRHPSVYGNLLKERIAKGGVKCWLVNTGWSGGKATQEGIKRMPIKATRALLNAALDGSLNSATFTKDPNFGFEVPVEVPGVDTKLLDPRGAWADGEEYDKTAQELVRKFVDNFQQFADH 521
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_PORGI (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis GN=pckA PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 2.442e-73 Identity = 151/277 (54.51%), Postives = 181/277 (65.34%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGK 892 D R LIGDDEH W +G+ N EGGCYAK I+LSRE EPDI+NAI+ A+LENV D ++D+ DKSVTENTR +YPI +I N P H K VI L+ DAFGVLPPVS L QT Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA L +KM+ GAT +LVNTGW+ G G RI + TR IIDAI GS+ A K F ++PT + GV ILDP +T+AD + LA F +NF FT GK Sbjct: 255 DPKRKLIGDDEHGWDKDGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHIENIVKPVSKAGHAKKVIFLSADAFGVLPPVSILTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMVGATAYLVNTGWN----GTGKRISIKDTRGIIDAILDGSIDKAPTKAIPFFDFKVPTALPGVDPNILDPRDTYADAAEWTTKAKDLAERFIKNFVKFTGNDAGK 526
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_SHESM (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain MR-4) GN=pckA PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 3.189e-73 Identity = 144/288 (50.00%), Postives = 175/288 (60.76%), Query Frame = 2 Query: 2 KDGXVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPT-ATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNF 862 KDG D R+LIGDDEH W GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R +Y D S+TENTRAAYP+E+I K G P V+ L CD GVLPPVS L+ Q YHF+SGYTA V TE G +TFS CFGA F YA +L ++++ G+ +LVNTGW+GG +G G R +P TR I+DAI SG L NA D + +P V GV + +L+P NTW+DK Y E KLA F +NF Sbjct: 211 KDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNRGAEPHAVVFLTCDVSGVLPPVSILSKEQAAYHFLSGYTAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTGWTGGPHGIGKRFDIPTTRAIVDAIVSGELKNAETVHLDTLNLAVPVAVPGVDTNLLNPVNTWSDKALYAEYAQKLAEAFTKNF 497
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_ENTS8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=pckA PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 3.189e-73 Identity = 147/276 (53.26%), Postives = 184/276 (66.67%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 889 D R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AI+ A+LENV + +D+ D S TENTR +YPI +I N P H VI L DAFGVLPPVS+L +QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+MLHPT+Y+ +L ++MQ GA +LVNTGW+ G G RI + TR IIDAI +GSL +A +F + IPT + GV ILDP NT+A + ++E +LA LF NFE +T+ G Sbjct: 259 DPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIRLSEEAEPDIYHAIRRDALLENVTVRDDG-SIDFDDASKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTASQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLMLHPTQYSEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDDAETFTLPLFNLAIPTSLPGVDERILDPRNTYASPEQWQEKAQQLAQLFISNFEKYTDTPAG 529
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_PSEPG (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas putida (strain GB-1) GN=pckA PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 5.440e-73 Identity = 141/273 (51.65%), Postives = 178/273 (65.20%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTE----DGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 871 D +RYLIGDDEH WG+ V N+EGGCYAKCIDLS + EP IW AIK GAVLENVV D + + DY+D S+T+N+RAAYP+E++ +G P VI L CD GVLPPVS LN Q YHF+SGYTALV TE GIK +TFS CFGA F +YA +L +++ + +LVNTGW+GG YG G R +P TR +I AI SG+L+ A + D+ +++P V GV +E+L+P WADK AY E LA LF NF+ F Sbjct: 232 DESRYLIGDDEHGWGEGVVFNMEGGCYAKCIDLSEKNEPVIWKAIKHGAVLENVVLDAN-KHADYTDVSLTQNSRAAYPLEHVAKRSEANLGGEPNAVIFLTCDLTGVLPPVSILNNEQAAYHFLSGYTALVGSTEMGSGGGIK---STFSTCFGAPFFPRPAGEYAELLIKRINGFNSKVYLVNTGWTGGGYGVGKRFSIPTTRAVIAAIQSGALVGAETEHLDIINLDVPKAVPGVETELLNPRTNWADKAAYDEAAKGLAKLFIENFKKF 500
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_PSEP1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pckA PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 5.440e-73 Identity = 141/273 (51.65%), Postives = 178/273 (65.20%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTE----DGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 871 D +RYLIGDDEH WG+ V N+EGGCYAKCIDLS + EP IW AIK GAVLENVV D + + DY+D S+T+N+RAAYP+E++ +G P VI L CD GVLPPVS LN Q YHF+SGYTALV TE GIK +TFS CFGA F +YA +L +++ + +LVNTGW+GG YG G R +P TR +I AI SG+L+ A + D+ +++P V GV +E+L+P WADK AY E LA LF NF+ F Sbjct: 232 DESRYLIGDDEHGWGEGVVFNMEGGCYAKCIDLSEKNEPVIWKAIKHGAVLENVVLDAN-KHADYTDVSLTQNSRAAYPLEHVAKRSEANLGGEPNAVIFLTCDLTGVLPPVSILNNEQAAYHFLSGYTALVGSTEMGSGGGIK---STFSTCFGAPFFPRPAGEYAELLIKRINGFNSKVYLVNTGWTGGGYGVGKRFSIPTTRAVIAAIQSGALVGAETEHLDIINLDVPKAVPGVETELLNPRTNWADKAAYDEAAKGLAKLFIENFKKF 500
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_PROMH (Phosphoenolpyruvate carboxykinase [ATP] OS=Proteus mirabilis (strain HI4320) GN=pckA PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 5.440e-73 Identity = 149/277 (53.79%), Postives = 184/277 (66.43%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGK 892 D R LIGDDEH W D+GV N EGGCYAK I LS+E EPDI+ AIK A+LENVV VD+ D S TENTR +YPI +I N P H K VI L DAFGVLPPV++L QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ GA +LVNTGW+ G G RI + TR IIDAI +G + A + VF + IPT + GV SEILDP +T+ADK + LA F +NF+ +T+ +G+ Sbjct: 259 DPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIHLSKEAEPDIYGAIKRDALLENVVVLADG-SVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHAKKVIFLTADAFGVLPPVARLTPEQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQYAQVLVKRMQACGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGDIDKAETQTLPVFNLAIPTALPGVNSEILDPRDTYADKAQWDVKADDLADRFVKNFDKYTDTPVGQ 530
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_SHEHH (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella halifaxensis (strain HAW-EB4) GN=pckA PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 7.105e-73 Identity = 143/291 (49.14%), Postives = 182/291 (62.54%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPT-ATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILXXGPN 934 D R+LIGDDEH W GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DE+ R DYS+ ++TENTRAAYP+E+I K+ G P V+ L CD GVLPPVSKL Q YHF+SGYTA V TE G +TFS CFGA F YA +L ++++ G+ +LVNTGW+GG +G G R +P TR I+DAI SG L + + + + +P + GV S++L+P NTW DK Y E LA FK NFE + ++ + I GPN Sbjct: 232 DPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVTDEN-RVPDYSNSTLTENTRAAYPLEHIAQRKLDNCGAEPHAVVFLTCDVSGVLPPVSKLTKEQAAYHFLSGYTAKVGSTEMGSTAAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTGWTGGPHGIGKRFDIPTTRAIVDAIVSGELKDVETEYLEKLNLHVPVAISGVDSKLLNPINTWEDKAQYAEFAQHLADSFKANFEKY---------QVPDSIKDAGPN 512
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_SHESR (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain MR-7) GN=pckA PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 9.280e-73 Identity = 143/288 (49.65%), Postives = 174/288 (60.42%), Query Frame = 2 Query: 2 KDGXVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPT-ATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNF 862 KDG D R+LIGDDEH W GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R +Y D S+TENTRAAYP+E+I K G P V+ L CD GVLPPVS L+ Q YHF+SGYTA V TE G +TFS CFGA F YA +L ++++ G+ +LVNTGW+GG +G G R +P TR I+DAI SG L N D + +P V GV + +L+P NTW+DK Y E KLA F +NF Sbjct: 211 KDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNRGAEPHAVVFLTCDVSGVLPPVSILSKEQAAYHFLSGYTAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTGWTGGPHGIGKRFDIPTTRAIVDAIVSGELKNVETVHLDTLNLAVPVAVPGVDTNLLNPVNTWSDKALYAEYAQKLAEAFTKNF 497 The following BLAST results are available for this feature:
BLAST of DC900116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900116 ID=DC900116; Name=DC900116; organism=Citrus sinensis; type=EST; length=1107bpback to top |