CN185974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E_DROME (Eukaryotic translation initiation factor 4E OS=Drosophila melanogaster GN=eIF-4E PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.252e-22 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = -2 Query: 197 LLATIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKEL--LDYSDTIGFIFHED--AKHDNRSKNRYT 430 LL IGE FDH D+ICGAV+N+R + KIS+WT + +NE A + IG + ++ L ++++ + H+D K + K+ YT Sbjct: 177 LLCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT 258 HSP 2 Score: 59.3066 bits (142), Expect = 2.252e-22 Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = -3 Query: 538 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKS---DTSWL 708 +FWSLYN+I PS++ +G+D+ FK I P WED GG+W + K D WL Sbjct: 115 DFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWL 174
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E_DICDI (Eukaryotic translation initiation factor 4E OS=Dictyostelium discoideum GN=eif4e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.093e-21 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = -2 Query: 200 LLATIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHED-AKHDNRSKNRY 430 ++A +GE FD DEICG V N R +KIS+WTK A +E A +G K++L+ TI + HED + SKN Y Sbjct: 171 VMACVGETFDSSDEICGIVYNSRKNGDKISVWTKTAQDEKATRDVGNCLKKILEIDQTIQYTPHEDFIRSSKGSKNLY 248 HSP 2 Score: 57.3806 bits (137), Expect = 1.093e-21 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = -3 Query: 529 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTV-IFPKGKSDTSWLYTV 708 +FW ++NN+ + S L G+ ++ FK+ IEPKWE GGKW V + K + D WL +V Sbjct: 111 DFWCVFNNLPNVSNLKQGSSYHLFKDDIEPKWEHESNKRGGKWFVMVKDKSRCDNQWLQSV 171
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: I4E1B_HUMAN (Eukaryotic translation initiation factor 4E type 1B OS=Homo sapiens GN=EIF4E1B PE=2 SV=3) HSP 1 Score: 65.4698 bits (158), Expect = 3.343e-20 Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = -2 Query: 200 LLATIGEQFD-HGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYS--DTIGFIFHED--AKHDNRSKNRY 430 LL IGE F+ H E+CGAVVN+R + +KI++WT+ A N+A + +G+ +KE L S IG+ H D K ++ +KN++ Sbjct: 159 LLCLIGESFEEHSREVCGAVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKERLGLSPKTIIGYQAHADTATKSNSLAKNKF 240 HSP 2 Score: 54.299 bits (129), Expect = 3.343e-20 Identity = 28/67 (41.79%), Postives = 39/67 (58.21%), Query Frame = -3 Query: 523 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKS----DTSWLYT-VCL 708 +FW+LY++I SKL+ G D+ FK+ I+P WED GG+W V K + D WL T +CL Sbjct: 96 DFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLVSLAKQQRHIELDRLWLETLLCL 162
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E3_CAEEL (Eukaryotic translation initiation factor 4E-3 OS=Caenorhabditis elegans GN=ife-3 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.345e-20 Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = -2 Query: 230 LLATIGEQFD-HGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDT--IGFIFHEDA 430 L+A +GEQFD +GD ICGAVVNVR + +K+SLWT++A+ + + IG+ K+ L DT + + H+D+ Sbjct: 129 LMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDS 198 HSP 2 Score: 55.0694 bits (131), Expect = 4.345e-20 Identity = 26/61 (42.62%), Postives = 34/61 (55.74%), Query Frame = -3 Query: 538 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKS----DTSWL 708 +FWSLYN+I L G+D+Y FK I+P WED GG+W V+ K + D WL Sbjct: 66 DFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWL 126
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4EB_DANRE (Eukaryotic translation initiation factor 4E-1B OS=Danio rerio GN=eif4e1b PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.114e-19 Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = -3 Query: 523 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKSDTS----WLYT-VCL 708 +FW LYNNI PSKL+ G D+ FK+ IEP WED GG+W + K T WL T +CL Sbjct: 68 DFWGLYNNIQLPSKLSSGCDYSMFKDGIEPMWEDRSNKCGGRWLITLAKQHRHTELDHFWLETLLCL 134 HSP 2 Score: 56.6102 bits (135), Expect = 2.114e-19 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = -2 Query: 200 LLATIGEQFDH-GDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSD--TIGFIFHED--AKHDNRSKNRY 430 LL IGE F +ICG+V+N+RA+ +KI+LWT NA N IG+++KE L IG+ H D K ++ +KN++ Sbjct: 131 LLCLIGEGFSSFSRDICGSVINIRAKGDKIALWTSNAENCETVTYIGRKYKESLGLPQKLVIGYQAHADTATKSNSITKNKF 212
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E_APLCA (Eukaryotic translation initiation factor 4E OS=Aplysia californica PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.944e-18 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = -2 Query: 197 LLATIGEQFD-HGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSD--TIGFIFHED--AKHDNRSKNRYT 430 LL IGE FD H +EICGA VN+R + +K+ LWT++A A IG + KE L IGF H D K + KNR+T Sbjct: 132 LLCLIGEGFDEHSEEICGATVNIRNKGDKLGLWTRDAQKTEATKKIGIKLKESLSVPPKIVIGFQAHSDTAGKAGSTVKNRFT 214 HSP 2 Score: 50.8322 bits (120), Expect = 4.944e-18 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = -3 Query: 523 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKSDTS----WLYT-VCL 708 +FW LYN+ SKL G D+ FK I+P WED GG+W + K + T WL T +CL Sbjct: 69 DFWGLYNHTLPASKLQSGCDYSVFKAGIQPMWEDAQNKKGGRWLINLNKTQRQTHLDDFWLETLLCL 135
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 8.833e-17 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = -3 Query: 541 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKSDTSW 708 +FW Y+++ P L +DF+ FK I+P WED NGGKW + KG + W Sbjct: 93 QFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCW 148 HSP 2 Score: 52.7582 bits (125), Expect = 8.833e-17 Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = -2 Query: 269 LLATIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLD 430 +LA +GEQF G+EICGAVV+VR +++ IS+W K AS++A I + +L+ Sbjct: 152 ILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.148e-16 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = -3 Query: 541 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKSDTSW 708 +FW Y+++ P L +DF+ FK I+P WED NGGKW + KG + W Sbjct: 93 QFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCW 148 HSP 2 Score: 52.7582 bits (125), Expect = 1.148e-16 Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = -2 Query: 269 LLATIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLD 430 +LA +GEQF G+EICGAVV+VR +++ IS+W K AS++A I + +L+ Sbjct: 152 ILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLN 205
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 2.536e-16 Identity = 21/56 (37.50%), Postives = 31/56 (55.36%), Query Frame = -3 Query: 541 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKSDTSW 708 +FWS+ + P+++ AD + FK ++P WEDP GGKW + KG S W Sbjct: 69 QFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIW 124 HSP 2 Score: 53.1434 bits (126), Expect = 2.536e-16 Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = -2 Query: 194 LLATIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLD--YSDTIGFIFHEDAKHDNRSKNRYTT 430 L+A IGEQF GDE+CGAV ++R +++ ISLW +NA + I + + +L + + + H+D D +S R+TT Sbjct: 128 LMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRD-QSSYRHTT 207
BLAST of CN185974 vs. ExPASy Swiss-Prot
Match: IF4E1_SCHPO (Eukaryotic translation initiation factor 4E-1 OS=Schizosaccharomyces pombe GN=tif451 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 9.399e-16 Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = -2 Query: 203 LLATIGEQFDH-GDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDY--SDTIGFIFHEDAKH--DNRSKNR 430 +LA IGE D G E+ G V+N+R ++++WTK+ +N M IG ++K++L+ S+TI F HED+ R+K R Sbjct: 135 VLAAIGETLDPTGQEVMGVVINMRKGFYRLAVWTKSCNNREVLMEIGTRFKQVLNLPRSETIEFSAHEDSSKSGSTRAKTR 215 HSP 2 Score: 50.447 bits (119), Expect = 9.399e-16 Identity = 25/64 (39.06%), Postives = 35/64 (54.69%), Query Frame = -3 Query: 529 EFWSLYNNIHHPSKLAVGADFYCFKNKIEPKWEDPVCANGGKWTVIFPKGKS----DTSWLYTV 708 EFW ++NNI+ S L + +D+ F+ + P+WED GGKW KG+ D WL TV Sbjct: 73 EFWGIHNNINPASSLPIKSDYSFFREGVRPEWEDVHNKTGGKW-AFQNKGRGGNALDEMWLTTV 135 The following BLAST results are available for this feature:
BLAST of CN185974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185974 ID=CN185974; Name=CN185974; organism=Citrus sinensis; type=EST; length=710bpback to top |