DC900113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.922e-18 Identity = 68/225 (30.22%), Postives = 103/225 (45.78%), Query Frame = 3 Query: 189 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYH 863 S R L AEFV T + ++ + A I ++K G + G A G + ++ T ISG H+NP++T R ++ AY+ Q LG+IC G + H + L GG + A E I TF L++ V + R+ V LA + +G AV + L P TG +NP R+ G AV N + WI+ + P +GA+A A + Sbjct: 80 SLTRKLGAEFVGTFILIFFATAAPIVNQKYG---GAISPFGNAACAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSIC-AGFALKGVFHPF--LSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRA-----VGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGN---YRQLWIYLIAPTLGAVAGAGVY 290
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.922e-18 Identity = 72/229 (31.44%), Postives = 111/229 (48.47%), Query Frame = 3 Query: 204 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVT-----FGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 LIAE + T ++ +V +K G V GI +G ++ V+VY ISG H NPAVT FG F ++V L Y++AQ +G+I G + + G TV G N G +L EII +F+L++ + ATD D + +A + +G + + PI+G +NPARS G A++ + + W++ VGP +G LA A + I Sbjct: 45 LIAEAIGTYFVIFAGCGSVAVNK----IYGSVTFPGICVTWGLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPL-----YIIAQLMGSILASGTLALLFDVTPQAYFG---TVPVGSN-GQSLAIEIIISFLLMFVISGVATD------DRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKH---VYTGLWVYVVGPIIGTLAGAFVYNLI 251
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.922e-18 Identity = 66/225 (29.33%), Postives = 106/225 (47.11%), Query Frame = 3 Query: 192 FYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG----ANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 854 F + L+AE + T ++ A V + + A V L GIA +G + VLVY ISG H NPAVT + L + AY+++Q +G+ ++ + + G T+ SG N S + E I TF L++ + R+ + LA L +G V + + P++G +NP RS G A++Y+ + WI+ V P VGA++ A Sbjct: 50 FLQKLMAEVLGTYFLIFAGCAAVAVNTQHDKA---VTLPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFV-IEFIITFYLMFVISGVATDNRA-----IGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYS---CYRGLWIYIVSPIVGAVSGA 262
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 9.041e-18 Identity = 62/223 (27.80%), Postives = 103/223 (46.19%), Query Frame = 3 Query: 204 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 LIAE + T ++ V+ + G + GI +G ++ V++Y T ISG H NPAVT + R+ + Y+ AQ G++ ++ + G T +S G AL AEII +F+L++ + R+ + LA + +G + + PI+G +NPARS G A++ K W++ VGPFVG A + ++ Sbjct: 45 LIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSS----GQALVAEIIISFLLMFVISGVATDSRATGE-----LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKG---IWVYIVGPFVGIFAGGFVYNFM 252
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.041e-18 Identity = 66/228 (28.95%), Postives = 106/228 (46.49%), Query Frame = 3 Query: 189 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 S R L AEFV T + ++ + A I ++K G + G A G + ++ T ISG H+NP++T R ++ AY+ Q L ++C +K H + L GG + + A E I +F L++ V + R+ V LA + +G AV + L P TG +NP R+ G AV N + WI+ + P +GALA A+ ++ + Sbjct: 71 SLTRKLGAEFVGTFILIFFATAAPIVNQKYG---GAISPFGNAACAGLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVF-HPF--LSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRA-----VGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGN---YRQLWIYLLAPTLGALAGASVYKAV 284
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.435e-17 Identity = 73/228 (32.02%), Postives = 117/228 (51.32%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVS--VATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 + +++E V+T L ++V+ A + G K + LG + A G ++ V++Y ISG H+NPAVT + R I+ Y AQ G+IC ++KA + H LG T +G + S L EII TF +++ T+ ATD + V LA L +G AV + + ++G +NPAR+ G A+ N + WI+++GP +G L+ A + YI Sbjct: 47 KKVVSEVVSTFLLVFVTCGAAGIYGSDKDR-----ISQLGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVL-HPIAVLG---TTTPTGPHWHS-LVIEIIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASN---LYTGLWIYFLGPVLGTLSGAWTYTYI 255
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.860e-17 Identity = 73/236 (30.93%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGL----------LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 + +++E VAT L ++++ CG G+ LG + A G ++ V++Y ISG H+NPAVT + R I+ Y AQ GAIC ++KA + H + +G T G + S L E+I TF +++ T+ ATD + V LA L +G AV + + I+G +NPAR+ G A+ N +D WI+++GP +G L+ A + +I Sbjct: 49 KKVVSEVVATFLLVFMT-------------CGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVI-HPVDVIG---TTTPVGPHWHS-LVVEVIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNK---FDGLWIYFLGPVMGTLSGAWTYTFI 257
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.860e-17 Identity = 65/225 (28.89%), Postives = 100/225 (44.44%), Query Frame = 3 Query: 192 FYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM----KHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 854 F + +IAE + T ++ A V +K+ G V GI +G + V+VY ISG H+NPAVT + R AY AQ G+ ++A +H + + G++ +L E I TF L++ V R+ + LA L +G V + L PI+G +NPAR+ G A+I + W++ GP GA+A A Sbjct: 52 FAQKVIAEILGTFFLIFAGCAAVAVNKRTG---GTVTFPGICITWGLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDV--------QSLAMEFIITFYLMFVVSGVATDNRA-----IGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGR---YTGIWVYIAGPVFGAVAGA 257
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: PDUF_SALTY (Propanediol diffusion facilitator OS=Salmonella typhimurium GN=pduF PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.305e-16 Identity = 76/254 (29.92%), Postives = 114/254 (44.88%), Query Frame = 3 Query: 210 AEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-----KAFMKHE--YNSLGGGANTV----------ASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAAAYHQYIL 875 AEF+ T LFL+ + + K + A G+ + I W G I + VY TAGISGGH+NPAVT L+L + + Y++AQ GA G L F + E ++ + G ++ A+ N A E++ T +L+ + + TD LAPL IG V ++ +T P+TG +NPAR FG + W W + V P +GA A AA ++Y + Sbjct: 11 AEFLGTGLFLFFGIGC-LSALKVAGASLGLWEICIIWGLG--ISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKG---PLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLF-----TWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFI 253
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.961e-16 Identity = 68/235 (28.94%), Postives = 103/235 (43.83%), Query Frame = 3 Query: 207 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-KAFMKHEYNSLGGGAN-----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY-------NNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 +AEF+ T+L + + V + G + I +G + + VY ISG HINPAVT GL + + Y+ +Q LGA G LV ++ H + A T + G+ L EIIGT VL+ V K + L PL +GF V+ + L+ TG INPAR FG + + D W W+ +GP +G + A+ + ++ Sbjct: 5 LAEFLGTMLLIILGDGVVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLA------DGLNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGASLYNWL 233 The following BLAST results are available for this feature:
BLAST of DC900113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900113 ID=DC900113; Name=DC900113; organism=Citrus sinensis; type=EST; length=960bpback to top |