DC900113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-15 Identity = 76/250 (30.40%), Postives = 104/250 (41.60%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN--TVASG----------YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSFG----AAVIYNNDKA-----WDDHWIFWVGPFVGALAAAAYHQYIL 875 R AEF+ TL+ + V + + G L AW FG M+ V Y GISGGHINPAVT + + RK + Y+VAQ +GA G + + GG + T A+G +A E IG +LV + + D DS+ P + L IGF V + +A T INPAR G A++I A W W W GP G +A A + + Sbjct: 348 REPFAEFLGTLVLVIFGVGGNLQATVTKGSGGSYESLSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGPIAGGIAGALIYDIFI 589
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_ECOLI (Glycerol uptake facilitator protein OS=Escherichia coli (strain K12) GN=glpF PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-15 Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 207 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAA-AYHQYILR 878 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + GP VGA+ A AY + I R Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_ECOL6 (Glycerol uptake facilitator protein OS=Escherichia coli O6 GN=glpF PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-15 Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 207 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAA-AYHQYILR 878 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + GP VGA+ A AY + I R Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-15 Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 207 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAA-AYHQYILR 878 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + GP VGA+ A AY + I R Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.443e-15 Identity = 66/230 (28.70%), Postives = 103/230 (44.78%), Query Frame = 3 Query: 204 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGPFVGALAA 851 L EF+ TL+ + + V G G + I +G + V V+ + +S H+NPAVT G+ L + + Y++AQ GA+ G LV K Y + N +A+ ++ G A L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR G ++++ D W WI VGP +GA A Sbjct: 5 LFGEFLGTLILILLGNGVVAGVVLPKTKSNSSGWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALA 227
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.215e-15 Identity = 73/254 (28.74%), Postives = 114/254 (44.88%), Query Frame = 3 Query: 117 HHHGKDYVD----PXPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYH 863 HHH VD P PL+ + + AEF T ++ ++T+I ++ G LLGIA + G + VLV ISG H+NPAV+ + + + + Y+ AQ LG+I VK Y+ + G TV A E + TFVL++ + + ATDP + V L + +G + M L P TG +NPAR+ G A+ + W++ V +GA+A ++ Sbjct: 75 HHHLWHPVDLPKIKPPVPLV-----------KKVGAEFFGTFTLIFTVLSTIIMDEQHK---GVESLLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGM----YHPVNPGIVTVPK-VGTVEAFFLEFVTTFVLLFIITALATDP------NAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGR---YTQIWVYLVATPLGAVAGEGFY 300
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: NIP21_ARATH (Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.215e-15 Identity = 64/230 (27.83%), Postives = 107/230 (46.52%), Query Frame = 3 Query: 192 FYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 F + L+AE V T ++ A + + + + V L+GIA +G +I VLVYC +S H NPAVT L +++ L + AY+ Q +G+ ++ + + GS L A E I T L+ V + T KR+ + L L IG V + + ++G +NPARS G A+++ + WI+ + P +GA++ A H+ + Sbjct: 46 FLQKLLAELVGTYYLIFAGCAAIAVNAQHNHV---VTLVGIAVVWGIVIMVLVYCLGHLSA-HFNPAVTLALASSQRFPLNQVPAYITVQVIGSTLASATLRLLFDLNNDVCSKKHDVFLGSSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKRTTEE-----LEGLIIGATVTLNVIFAGEVSGASMNPARSIGPALVWG---CYKGIWIYLLAPTLGAVSGALIHKML 263
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 4.200e-15 Identity = 74/257 (28.79%), Postives = 111/257 (43.19%), Query Frame = 3 Query: 207 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW--IFWVG-------------PFVGALAAA-AYHQYILR 878 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + + G P VGA+ A AY + I R Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFSPIVGAIVGAFAYRKLIGR 257
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.200e-15 Identity = 63/204 (30.88%), Postives = 93/204 (45.59%), Query Frame = 3 Query: 207 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 767 I EF+ T L ++ V V K + A G+ + I W G + + VY TAG+SG H+NPAVT L+ + + Y+++Q LGA LV A ++ E SL G +T + G A E + T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 10 IGEFLGTALLIFFGVGCVAA-LKVAGASFGLWEISIMWGMG--VALAVYATAGLSGAHLNPAVTIALWKFACFDGKKVIPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALIMALTDDGNGVPRG---PLAPLLIGILIAVIGGAMGPLTGFAMNPARDFG 207
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: GLPF_STRPN (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae GN=glpF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.163e-15 Identity = 65/230 (28.26%), Postives = 103/230 (44.78%), Query Frame = 3 Query: 204 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGPFVGALAA 851 L EF+ TL+ + + V G G + I +G + V V+ + +S ++NPAVT G+ L + + Y++AQ GA+ G LV K Y + N +A+ ++ G A L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR G ++++ D W WI VGP +GA A Sbjct: 5 LFGEFLGTLILILLGNGVVAGVVLPKTKSNSSGWIVITMGWGIAVAVAVFVSGKLSPAYLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALA 227 The following BLAST results are available for this feature:
BLAST of DC900113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900113 ID=DC900113; Name=DC900113; organism=Citrus sinensis; type=EST; length=960bpback to top |