CN185969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_OCHA4 (50S ribosomal protein L2 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.191e-32 Identity = 70/143 (48.95%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V DK++ A ++ + G+ MPLA M +GTI+HN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRLAVGDKVV---AGNSVDVKPGNAMPLASMPVGTIVHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVPGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_GLUOX (50S ribosomal protein L2 OS=Gluconobacter oxydans GN=rplB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.191e-32 Identity = 72/143 (50.35%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D+++ AH D+ G+ MPL M +GTI+HNIE+ G GGKL R+AGT A+++ + + + V+L SG +L+ C AT+G VSNP + + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRVKVGDRVISG-AHTDVKP--GNAMPLGAMPVGTIVHNIELKQGAGGKLARSAGTYAQLVGKD-AGYAQVKLQSGELRLVRGECMATVGAVSNPDNMNQHMGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_DICTD (50S ribosomal protein L2 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.191e-32 Identity = 70/124 (56.45%), Postives = 92/124 (74.19%), Query Frame = 1 Query: 373 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M+ +++ ++G+ +PL + GT+IHN+E+ PG+GG+LVRAAGT+A+IL + + VRLPSG +L D CRATIG VSN H L KAG+SRWLGRRP VRG AMN VDHPHGGGEG++ Sbjct: 117 MSGENVDIKVGNNLPLKNIPDGTLIHNLELYPGRGGQLVRAAGTAAQILGKE-GKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRGSAMNAVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.191e-32 Identity = 70/143 (48.95%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D ++ A +++ + G+ MPL M +GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP HG KAG+SRW G+RP VRGVAMNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRLGVGDSVV---AGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-HGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVAMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_GEOKA (50S ribosomal protein L2 OS=Geobacillus kaustophilus GN=rplB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.556e-32 Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 1 Query: 364 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M M+ D + +IG+ +PL + +GT++HNIE+ PG+GG+LVRAAGTSA++L + + +VRL SG ++I +CRAT+G V N H + KAG++RWLG RP VRG MNPVDHPHGGGEG++ Sbjct: 114 MEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKE-GKYVIVRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRARWLGIRPTVRGSVMNPVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BACST (50S ribosomal protein L2 OS=Bacillus stearothermophilus GN=rplB PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.556e-32 Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 1 Query: 364 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M M+ D + +IG+ +PL + +GT++HNIE+ PG+GG+LVRAAGTSA++L + + +VRL SG ++I +CRAT+G V N H + KAG++RWLG RP VRG MNPVDHPHGGGEG++ Sbjct: 114 MEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKE-GKYVIVRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRARWLGIRPTVRGSVMNPVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RICAH (50S ribosomal protein L2 OS=Rickettsia akari (strain Hartford) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.032e-32 Identity = 68/143 (47.55%), Postives = 100/143 (69.93%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K +V D++M D + +IG+C+PL + +GT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PQKLSVGDRVMSSQ---DADIKIGNCLPLKFIPVGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDRKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_ORITI (50S ribosomal protein L2 OS=Orientia tsutsugamushi (strain Ikeda) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.032e-32 Identity = 73/143 (51.05%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+ V DKI+ +IN +G+C+PL + +GTIIHNIE+ PG+GG++ R+AGT A +L + S + ++ SG + I RAT+G+VSN H KAG+ RWLGRRPVVRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PRNLNVGDKIISS-DKAEIN--VGNCLPLEVIPVGTIIHNIEIKPGKGGQVARSAGTYAVLLNKD-SGYAQIKFRSGEVRRISLASRATVGSVSNIDHKNISYGKAGRVRWLGRRPVVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_GEOSW (50S ribosomal protein L2 OS=Geobacillus sp. (strain WCH70) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.032e-32 Identity = 66/127 (51.97%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 364 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M M+ D + ++G+ +PL + +GT +HNIE+ PG+GG+LVRAAGTSA++L + + +VRL SG ++I CRAT+G V N H K+ KAG++RWLG RP VRG MNPVDHPHGGGEG++ Sbjct: 114 MEIMSGPDADIKVGNALPLENIPVGTFVHNIELKPGRGGQLVRAAGTSAQVLGKE-GKYVIVRLASGEVRMILGACRATVGEVGNEQHELVKIGKAGRARWLGIRPTVRGSVMNPVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BARHE (50S ribosomal protein L2 OS=Bartonella henselae GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.032e-32 Identity = 72/143 (50.35%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D ++ ++VDI G+ MPL M +GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP H KAG+SRW GRRP VRGVAMNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRLDVGDSVIAG-SNVDIKP--GNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-QGMAILRLNSGEQRLVSSGCFATVGAVSNPDHANINDGKAGRSRWRGRRPHVRGVAMNPVDHPHGGGEGRT-SGGRH 244 The following BLAST results are available for this feature:
BLAST of CN185969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185969 ID=CN185969; Name=CN185969; organism=Citrus sinensis; type=EST; length=763bpback to top |