DC900110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_XENLA (Fatty acid desaturase 2 OS=Xenopus laevis GN=fads2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13 Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = -3 Query: 274 VTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 585 VT + H+ + H K DW Q + T +I S + DWF G L FQ+EHHLFP +PR KI+P+VR LC K+N+ Y + +R+L+ Sbjct: 339 VTQMNHLPMAIEH---------EKYQDWLNTQLAATCNIEPSFFNDWFSGHLNFQIEHHLFPTMPRHNYWKIAPLVRSLCSKYNVTYEEKCLYHGFRDVLRSLK 433
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS1_PAPAN (Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13 Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = -3 Query: 274 VTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 585 VT + HI ++H + DW Q T ++ S++ DWF G L FQ+EHHLFP +PR K++P+V+ LC KH + Y+S A I +L+ Sbjct: 337 VTQMNHIPMHIDH---------DRNMDWVSTQLQATCNVHKSAFNDWFSGHLNFQIEHHLFPMMPRHNYHKVAPLVQSLCAKHGIEYQSKPLLSAFADIIHSLK 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS1_HUMAN (Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13 Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = -3 Query: 274 VTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 585 VT + HI ++H + DW Q T ++ S++ DWF G L FQ+EHHLFP +PR K++P+V+ LC KH + Y+S A I +L+ Sbjct: 337 VTQMNHIPMHIDH---------DRNMDWVSTQLQATCNVHKSAFNDWFSGHLNFQIEHHLFPTMPRHNYHKVAPLVQSLCAKHGIEYQSKPLLSAFADIIHSLK 431
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FAD2L_MOUSE (Fatty acid desaturase 2-like protein OS=Mus musculus PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12 Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = -3 Query: 265 KGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLRGAA 516 + +DW Q T +I S + DWF G L FQ+EHHLFP +PR K++P+V+ LC KH + Y + +A +R+L+ +A Sbjct: 395 ENHDWLSTQVVATCNIEQSFFNDWFTGHLNFQIEHHLFPTMPRHNYHKVAPLVKSLCAKHGLQYINKPILKAFGDIVRSLKKSA 478
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS2_DANRE (Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = -3 Query: 277 VTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTL 585 VT + HI +++ K DW Q T +I S++ DWF G L FQ+EHHLFP +PR + +P VR LC+K+ + Y+ + + A IR+L Sbjct: 337 VTQMSHIPMNIDY---------EKNQDWLSMQLVATCNIEQSAFNDWFSGHLNFQIEHHLFPTVPRHNYWRAAPRVRALCEKYGVKYQEKTLYGAFADIIRSL 430
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS1_RAT (Fatty acid desaturase 1 OS=Rattus norvegicus GN=Fads1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 319 VTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRS 585 VT + HI ++H + DW Q T ++ S++ +WF G L FQ+EHHLFP +PR K++P+V+ LC K+ + Y S Sbjct: 340 VTQMNHIPMHIDH---------DRNVDWVSTQLQATCNVHQSAFNNWFSGHLNFQIEHHLFPTMPRHNYHKVAPLVQSLCAKYGIKYES 419
BLAST of DC900110 vs. ExPASy Swiss-Prot
Match: FADS1_MOUSE (Fatty acid desaturase 1 OS=Mus musculus GN=Fads1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 319 VTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRS 585 VT + HI ++H + DW Q T ++ S++ +WF G L FQ+EHHLFP +PR K++P+V+ LC K+ + Y S Sbjct: 340 VTQMNHIPMHIDH---------DRNVDWVSTQLQATCNVHQSAFNNWFSGHLNFQIEHHLFPTMPRHNYHKVAPLVQSLCAKYGIKYES 419 The following BLAST results are available for this feature:
BLAST of DC900110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900110 ID=DC900110; Name=DC900110; organism=Citrus sinensis; type=EST; length=713bpback to top |