CN185965

Overview
NameCN185965
Unique NameCN185965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig181 contig Csv1_Contig181:1..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.725e-36
Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = -3
Query:  215 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 751
            GI + F  +L E+A A  +GDP DP V+ GP V + Q +++L+YIE  + EG  L+            ++PT+F +VT+ M +A  E+FGPVMA++ F+T EEAI  AN T  GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG K+SG GR+ G  ++ +Y QVKSV
Sbjct:  294 GIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLACEEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.253e-36
Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = -3
Query:  215 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 742
            + FE KLVE+      GDP DP+V  GP V  +  +++LSYI  GK +GA +L                  PT+FT+ T++M + K EIFGPVM+++ F   EE I+ ANNT++GLAAG+ ++ LN A+ V   + AGI WIN +    S+ P GGYK SG GR+ G+E+L++Y Q KSV
Sbjct:  299 EAFEAKLVERVARIKAGDPMDPSVNFGPLVSFEHQEKVLSYIALGKEQGARVLAGGDAWNSGEWAKGAWAAPTVFTDCTDEMRVVKEEIFGPVMSVLAFDDEEEVIRRANNTKYGLAAGVFSESLNRAHRVIHQLEAGICWINTWGESPSEMPVGGYKESGIGRENGVETLNHYTQTKSV 478          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   L
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   L
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   L
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   L
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   L
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEDALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.556e-36
Identity = 74/180 (41.11%), Postives = 112/180 (62.22%), Query Frame = -3
Query:  215 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 748
            I+DEF  ++VE+ K   +GDP D +   GPQ  +   +++L Y E G +EGA L+            +EPT+FT V + M +AK E FGP+M + KF+   ++  ++ ANNT +GLA+G+ T+D+N A  VS  + AG ++IN Y   D   P+GG K SGFG+D G E+L+ YL++K+V
Sbjct:  740 IHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQRPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDINKAMYVSDKLEAGTVFINTYNKTDVAAPFGGMKQSGFGKDLGEEALNEYLKIKTV 919          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.562e-36
Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = -3
Query:  215 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 751
            GI+D F ++LVE+ K   +G+P DP  + GP V K Q ++++ YI  GK++GA L                 +EPT+FT VT+ M IA+ EIFGPVM+++KF   +E I  AN+T  GLAAG+ T+DL  A+ V   ++AG  WIN Y     + P+GG+K SG GR+  L +L  Y Q+KS+
Sbjct:  294 GIHDRFVERLVERTKKIRIGNPLDPETQMGPLVSKAQHEKVVGYIGIGKQDGAVLACGGNVPSLQGFDGGFFVEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDEVIDRANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSI 476          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.562e-36
Identity = 78/182 (42.86%), Postives = 112/182 (61.54%), Query Frame = -3
Query:  215 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 748
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++LSYI+ GK EGA L                 IEPT+F +VT+ M IA+ EIFGPVM++++F   +E I  AN++  GLAAG+ T DL+  + V   I+AG  WIN Y     + P+GGYK SG GR+ G+ +L +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTSVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
The following BLAST results are available for this feature:
BLAST of CN185965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
BETB_RHOSK1.725e-3643.58Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_CHRSD2.253e-3643.89Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
BETB_YERPP3.843e-3642.31Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPN3.843e-3642.31Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPE3.843e-3642.31Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPA3.843e-3642.31Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERP33.843e-3642.31Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
AL1L2_MOUSE6.556e-3641.11Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
BETB_RHILO8.562e-3642.62Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
BETB_BRUMB8.562e-3642.86Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002C10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185965 ID=CN185965; Name=CN185965; organism=Citrus sinensis; type=EST; length=753bp
TTTTTTTTTTTTTTTTTAAATATCAATGTAGTATTAATATTATTCCCTTT
AGAGGTAATACAAAAACCCTTGTATCTTATGAGAGCCCTTTAATGAGAAT
AATTTGCAAACCCCAAACTCAGAAAGTCTTGCAACTTTAATCAGCCACCA
CTTATTTTTTCAAACCTGGGTGGGTAAGTGTTCACAGCCAAGGAGAATGG
GAAAGGGGAGTCACAACGGACTTGACCTGCAAATAGTTATGTAGAGATTC
CAGTCCACAGTCTCTACCAAATCCACTCATCTTGTATCCTCCGTAAGGGC
AGTCGCTGTCAAAAGCAAAATAACAATTGATCCATATAATGCCTGCTCGA
ATTGATCTAGAGACGGTATTAGCCACATTCAAGTCCTTTGTCATAATGCC
TGCTGCTAGGCCATGTCGGGTATTATTTGCACTCTTAATTGCCTCCTCAA
CAGTCTTGAATTTCATCAATGCCATCACAGGTCCGAAAATTTCATTCTTT
GCTATCAGCATGTCTTCCGTAACATTTGTGAAAATTGTAGGCTCAATATA
ATACCCCTTCTTGCCGATAGGCTTACCCCCTGTTAACAATGGGGCTCCTT
CCCTCTTGCCATGCTCAATGTACGAAAGAATTCTATCGAACTGCTTCTTA
TCGACCTGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCACCAACTAC
CCAAGCTTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCATAAATTC
CTT
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