CN185965

Overview
NameCN185965
Unique NameCN185965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.907e-35
Identity = 80/182 (43.96%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE K+VE+     VG+P D     GP V     + +L YI  GK EGA +L                  PT+FT+ T+DM I + EIFGPVMA++ ++T EE I+ AN+T  GLAAGI+T+DLN A+ V   + AGI WIN +   D+  P GGYK SG GR+ G+ SL+N+ ++KSV   L
Sbjct:  302 FEAKIVERVARIRVGNPEDENTNFGPLVSFPHMESVLGYIAKGKEEGARVLCGGERLTDGEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILSYETEEEVIRRANDTDFGLAAGIVTRDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.254e-35
Identity = 79/182 (43.41%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE K+VE+     VGDP D     GP V     + +L YI  GK +GA LL                  PT+FT+ T++M I + EIFGPVM+++ ++T EE I+ AN+T  GLAAG++TKDLN A+ V   + AGI WIN +   D+  P GGYK SG GR+ G+ SL+N+ ++KSV   L
Sbjct:  302 FEAKIVERVARIRVGDPQDENTNFGPLVSFAHMESVLGYIAKGKEQGARLLCGGDRLTDGDFAKGAYVAPTVFTDCTDEMTIVREEIFGPVMSILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.249e-35
Identity = 74/178 (41.57%), Postives = 109/178 (61.24%), Query Frame = -3
Query:  215 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 748
            +YDEF  +L + A+A  VG   D     GP V KKQ +R+L YIE G + GA ++T           ++PTIF++V EDM I K EIFGPV  +MK+K ++E +K AN++ +GLAAGI T+ ++ A   S  + AG +W+N +  F    P+GG+K SG GR+ G E +  Y + K++
Sbjct:  311 VYDEFVSRLRKNAEARKVGPGNDTGNNMGPLVSKKQHERVLGYIEDGVKAGATVVTGGKKIGDKGYFVQPTIFSDVKEDMRICKEEIFGPVTCVMKYKDMDEVVKRANDSIYGLAAGICTRSMDTALRYSTYLNAGTVWVNTWNNFCPSMPFGGFKQSGIGRELGKEVVDMYTEPKAI 488          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 7.248e-35
Identity = 71/180 (39.44%), Postives = 111/180 (61.67%), Query Frame = -3
Query:  212 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPL-LTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 748
            IY+EF K+ VE+A    +GDP++     GPQ+D++Q+ ++L YI+  + +GA L              IEPT+F+ V+++M IAK EIFGPV  LMKF+ +++ I   NN+ +G+AA I T D+N   T + ++  G IW+N +  +    P+GG+K SG  R+ G  +L  Y +VKSV+
Sbjct:  309 IYEEFVKRSVEQATRRKIGDPYELDTEHGPQIDEEQYTKVLDYIKSAQEQGAKLKYGGNKHGDKGGYYIEPTVFSEVSDNMKIAKEEIFGPVQLLMKFRDLDDVIDRCNNSDYGMAAAIFTNDINRIMTFTNAVNTGTIWVNTFHHWFPQAPFGGFKTSGISREMGKYALREYTEVKSVI 488          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.248e-35
Identity = 78/182 (42.86%), Postives = 107/182 (58.79%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE K+ E+     +G+P D     GP V     + +L YI  GK EGA +L                  PT+FT+ T+DM I + EIFGPVMA++ ++T EE I+ AN+T  GLAAG++TKDLN A+ V   + AGI WIN +   D+  P GGYK SG GR+ G+ SL+N+ ++KSV   L
Sbjct:  302 FEAKIAERVARIRIGNPEDENTNFGPLVSFPHMESVLGYIAKGKEEGARVLCGGERLTDGEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.236e-34
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = -3
Query:  188 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI--EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPLSHSPW 748
            I DEF  KLV+  K   + DPF+   R GP V K Q++R+L ++ + + EGA +L               EP I +NVT  M I + E+FGP + +  F T +EAI+ AN++++GLA  +++ DL   + VS++ +AGI+W+NC        P+GG K SGFGR+ G   L NYL VK V   +S  PW
Sbjct:  306 IADEFLDKLVKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKGYFVEPAIVSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPW 494          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 77/182 (42.31%), Postives = 109/182 (59.89%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE K++E+ K   +GDP D A   GP V     + +L YIE G+ EGA LL                  PT+FT+  +DM I + EIFGPVM+++ + + EE I+ AN+T +GLAAG++T+DLN A+ V   + AGI WIN +    ++ P GGYK SG GR+ GL +L +Y ++KSV   L
Sbjct:  302 FEAKVLERVKRIRLGDPLDDATNFGPLVSYAHMESVLGYIEKGRSEGARLLIGGTRVSDGDYAKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILIYDSEEEVIRRANDTDYGLAAGVVTRDLNRAHRVIHKLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLVTLGHYTRIKSVQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = -3
Query:  188 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI--EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPLSHSPW 739
            EF  ++V+  K   + DPF+   R GP + K Q+D+I+ +I   K EGA +L               EPTI T++T  M I K E+FGPV+ +  FKT +EAI+ AN+T +GLA  + +KDL     V++++  G +W+NC        P+GG K SGFGR+ G   + NYL +K V + +S  PW
Sbjct:  311 EFVDRMVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYYIEPTIITDITTSMQIWKEEVFGPVICVKTFKTEDEAIELANDTEYGLAGAVFSKDLERCERVTKALEVGAVWVNCSQPCFVHAPWGGVKRSGFGRELGEWGIENYLNIKQVTSDISDEPW 496          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.597e-34
Identity = 75/181 (41.44%), Postives = 108/181 (59.67%), Query Frame = -3
Query:  215 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXI---EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 748
            I DEF K+L  + +A ++GDP D A + GP V   Q ++++SYIE GK EGA L+                +PT+F +VT+DM IA+ EIFGPVM ++ F   +E I  AN +  GL+ G+ T DL  A+ V   + AG +WIN Y     + P+GG K SGFGR+  L +L +Y ++K+V
Sbjct:  296 IKDEFLKRLKVRTEAMLIGDPMDEATQVGPMVSWAQREKVISYIEKGKAEGATLIAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDAEDEVIARANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.698e-34
Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = -3
Query:  215 IYDEFEKKLVEKA-KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPL-LTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 748
            +YD+F +   +   + ++VG PFD     GP V+K Q++RI +YIE GK+EGA L L            I PTIF + +E+M I K EIFGPV+A+ KFKT +EAI+ ANNT +GLAA   TKDL  A+ VS  + AG+++IN     D   P+GG KMSG G + G   +  Y Q+K+V
Sbjct:  309 VYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFINSTENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAV 488          
The following BLAST results are available for this feature:
BLAST of CN185965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
BETB_PSEPF1.907e-3543.96Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_PSEFS3.254e-3543.41Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
ALDH2_LEITA4.249e-3541.57Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
CROM_ENTDO7.248e-3539.44Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
BETB_PSEF57.248e-3542.86Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BADH2_ARATH1.236e-3439.68Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
BETB_PSEMY2.109e-3442.31Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]
BADH_ATRHO2.109e-3438.71Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BETB_RHIL33.597e-3441.44Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
YLX7_SCHPO4.698e-3445.00Putative aldehyde dehydrogenase-like protein C922.... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002C10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185965 ID=CN185965; Name=CN185965; organism=Citrus sinensis; type=EST; length=753bp
TTTTTTTTTTTTTTTTTAAATATCAATGTAGTATTAATATTATTCCCTTT
AGAGGTAATACAAAAACCCTTGTATCTTATGAGAGCCCTTTAATGAGAAT
AATTTGCAAACCCCAAACTCAGAAAGTCTTGCAACTTTAATCAGCCACCA
CTTATTTTTTCAAACCTGGGTGGGTAAGTGTTCACAGCCAAGGAGAATGG
GAAAGGGGAGTCACAACGGACTTGACCTGCAAATAGTTATGTAGAGATTC
CAGTCCACAGTCTCTACCAAATCCACTCATCTTGTATCCTCCGTAAGGGC
AGTCGCTGTCAAAAGCAAAATAACAATTGATCCATATAATGCCTGCTCGA
ATTGATCTAGAGACGGTATTAGCCACATTCAAGTCCTTTGTCATAATGCC
TGCTGCTAGGCCATGTCGGGTATTATTTGCACTCTTAATTGCCTCCTCAA
CAGTCTTGAATTTCATCAATGCCATCACAGGTCCGAAAATTTCATTCTTT
GCTATCAGCATGTCTTCCGTAACATTTGTGAAAATTGTAGGCTCAATATA
ATACCCCTTCTTGCCGATAGGCTTACCCCCTGTTAACAATGGGGCTCCTT
CCCTCTTGCCATGCTCAATGTACGAAAGAATTCTATCGAACTGCTTCTTA
TCGACCTGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCACCAACTAC
CCAAGCTTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCATAAATTC
CTT
back to top