DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 75/218 (34.40%), Postives = 108/218 (49.54%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R + AE  AT   VF   G++    +    +  L  ++A GL +  ++ AVGHISGAH+NPAVT AF         +   Y AAQL GAV+ +  L  +  P       + T  P  S  QA  +EI +T  + FV    AT D +  G L  +  AVG ++ +  +     +G  MNPAR+  PAI +  +   WVY VGP  G  +G+  Y+ +
Sbjct:    9 FWRAIFAEFFATLFYVFFGLGASL--RWTPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLT--LQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDFL 222          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 62/226 (27.43%), Postives = 115/226 (50.88%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL--HPIKHIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA-IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNM---IRETDKPAHA 702
            R ++AE + T+ LV +  GS   + + ++  +    +   GL+V  +  A GH+SG H+NPAVT+           +   Y  +Q  GA++ +  ++       +  +G T  +P  S  Q +++E ++TF ++FV   V  + +  +   A +A+G ++    + A   +G SMNPAR+ GPA+    Y  +WVY VGP  G  +    Y +   +R+ D+ +++
Sbjct:   24 RMLVAEFLGTFFLVAIGIGST--TGWTDYSPTLTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRTDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGNYTDLWVYWVGPIVGGIVAGAVYRLFFKVRKGDEESNS 247          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.257e-21
Identity = 72/228 (31.58%), Postives = 108/228 (47.37%), Query Frame = 1
Query:   64 EIIATYLLVFV---TCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQA-------------LIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSF----------YKGIWVYLVGPXTGTFMGAWSYN 669
            E+I T LL+      C    L      +   +      GL V +  YAVG ISGAH+NPA+T+A A V  FPWK+VP+Y AAQ+ GA+  ++   + LH + H  +T    + L               ++ E++ TF ++    A+  +    G L  + VG  +    +  G  +G ++NPAR +GP IA +F          +K  WV +VGP  G   G   YN
Sbjct:    7 EVIGTMLLIIFGAGVCAGVNLKKSLSFQSGWIVVVFGWGLGVAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVI--IYLHYLPHWKSTDDPAAKLGVFSTGPSIPHTFANVLSEVIGTFVLVLGILAIGANQFTEG-LNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFLPIPGKGSSNWKYAWVPVVGPILGGSFGGVFYN 231          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.144e-21
Identity = 74/241 (30.71%), Postives = 117/241 (48.55%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGS--DLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQARY 720
            P   +  +AE I+  +L+FV  GS +  A+   +++  G +   GLI   + +A+          +ISG H+NPAVT       +    +  +Y  AQL G+V A L L++       +G  S S       A++ EIV+TF +++   A A D K   +G +A IA+G  V    +  G   G SMNPA + GPA+ +  +   WVY +GP  G  + A  Y++I    +P   +  A Y
Sbjct:   17 PDTAKAAVAEFIS--MLIFVFAGSGSGMAFS--KLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAA-VGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLPTADY 252          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.144e-21
Identity = 73/215 (33.95%), Postives = 110/215 (51.16%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            P  L+  +AE I+T  L+FV  GS +  A++  ++++ GA+   GL+   + +A G         +ISG H+NPAVT       +    +  +Y  AQL G+V A L L+       +   G ++  G  L A + EIV+TF +++   A A D K  ++G +A IA+G  V    +  G  SG SMNPA   GPA+ S  +   WVY  GP  G
Sbjct:   17 PDALKAALAEFIST--LIFVVAGSGSGMAFN--KLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGV-LNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVG 226          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.657e-21
Identity = 74/218 (33.94%), Postives = 107/218 (49.08%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTL----RVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V AE   T   VF   G++   A     V  L  ++A GL++  M+ ++GH+SGAH+NPAVT AF         +   Y AAQL GAV+ +  L       +     + T  P  S  QA  +EI +T  + FV    AT D +  G L  +  A+G ++ +  +     +G SMNPAR+  PA+ +  +   WVY VGP  G  +G   Y+ I
Sbjct:    9 FWRAVFAEFFGTMFYVFFGLGASLKWAAGPANV--LVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLT--LQFVLCIFATYDERRNGRLGSVSLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRNFTNHWVYWVGPIIGGALGGLVYDFI 222          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.146e-21
Identity = 74/225 (32.89%), Postives = 113/225 (50.22%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSAS-LTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            P  L+  +AE I+T++ VF   GS    AY+  +++  GA+   GLI   + +A           +ISG H+NPAVT       +    +  +Y  AQL G++ AS L + V    +   G +   G    AL++EIV+TF +++   A A D K   IG +A IA+G  V    ++ G  +G SMNPA + GPA+ S  +   WVY  GP  G  +    Y ++
Sbjct:   17 PDTLKAGLAEFISTFIFVFAGSGSGI--AYN--KLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFGLSEGVGVG-PALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.146e-21
Identity = 75/218 (34.40%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R + AE  AT   VF   GS+   A     V  L  ++A GL +  ++  VGHISGAH+NPAVT AF         +   Y AAQL GAV+ +  L  +  P       + T     S  QA  +EI +T  + FV    AT D +  G +  +  AVG ++ +  +     +G  MNPAR+  PAI +  +   WVY VGP  G  +G+  Y+ +
Sbjct:    7 FWRAIFAEFFATLFYVFFGLGSSLRWAPGPLHV--LQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLT--LQFVLCIFATYDERRNGRMGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFL 220          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.390e-20
Identity = 74/229 (32.31%), Postives = 112/229 (48.91%), Query Frame = 1
Query:   25 EHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDL-QALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            E Y PG L+   AE I+T + VF   GS    +    +++  G +   GLI   + +A           +ISG H+NPAVT       +    +  +Y  AQL G+  A   LR      +  GT   +G  + +AL++EIV+TF +++   A A D K  ++G +A IA+G  V    ++ G   G SMNPA + GPA+ S  +   WVY VGP  G  +    Y ++
Sbjct:   13 EVYHPGALKAAFAEFISTLIFVFAGQGSGMAFS----KLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGG-QATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELL 236          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.390e-20
Identity = 73/224 (32.59%), Postives = 110/224 (49.11%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGA-------SVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTTS--PSGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L +F++ GSA    Y        GA       S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A+  L  +    P   +G  S  P     Q L +EI+ T  ++    A  TD +   +G  A +A+G +V +  +LA   +G  +NPAR+ G A+ +  ++  WV+ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLA-TTDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFI 232          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
MIP_CANFA9.623e-2234.40Lens fiber major intrinsic protein OS=Canis famili... [more]
AQP_ANOGA9.623e-2227.43Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
GLPF_BACSU1.257e-2131.58Glycerol uptake facilitator protein OS=Bacillus su... [more]
TIP12_ORYSJ2.144e-2130.71Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP11_ARATH2.144e-2133.95Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
MIP_RANPI3.657e-2133.94Lens fiber major intrinsic protein OS=Rana pipiens... [more]
TIP1_MEDTR8.146e-2132.89Probable aquaporin TIP-type OS=Medicago truncatula... [more]
MIP_RAT8.146e-2134.40Lens fiber major intrinsic protein (Fragment) OS=R... [more]
TIP11_MAIZE1.390e-2032.31Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
AQP1_PIG1.390e-2032.59Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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