DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.815e-20
Identity = 74/218 (33.94%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R + AE  AT   VF   G++   A     V  L  ++A GL +  ++  VGHISGAH+NPAVT AF         +   Y AAQL GAV+ +  L  +  P       + T     S  QA  +EI +T  + FV    AT D +  G +  +  AVG ++ +  +     +G  MNPAR+  PAI +  +   WVY VGP  G  +G+  Y+ +
Sbjct:    9 FWRAIFAEFFATLFYVFFGLGASLRWAPGPLHV--LQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLT--LQFVLCIFATYDERRNGRMGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFL 222          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.370e-20
Identity = 75/218 (34.40%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R + AE  AT   VF   G++   A     V  L  ++A GL +  ++ AVGHISGAH+NPAVT AF         +   Y AAQL GAV+ +  L  +          + T  P  S  QA  +EI +T  + FV    AT D +  G L  +  AVG ++ +  +     +G  MNPAR+  PAI +  +   WVY VGP  G  + +  Y+ +
Sbjct:    9 FWRAIFAEFFATLFYVFFGLGASLRWAPGPLHV--LQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLT--LQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLASLLYDFL 222          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.370e-20
Identity = 72/225 (32.00%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGA-------SVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG---IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L VF++ GSA    Y        GA       S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A+  L  +    P   +G    +P  +  Q L +EI+ T  +  V   +AT  +   +L G   +A+G +V +  +LA   +G  +NPAR+ G ++ +  +K  W++ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSLGRNELAPGVNSGQGLGIEIIGT--LQLVLCVLATTDRRRRDLGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFKDHWIFWVGPFIGGALAVLIYDFI 232          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.096e-20
Identity = 74/218 (33.94%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R + AE  AT   VF   G++   A     V  L  ++A GL +  ++  VGHISGAH+NPAVT  F         +   Y AAQL GAV+ +  L  +  P       + T     S  QA  +EI +T  + FV    AT D +  G L  +  AVG ++ +  +     +G  MNPAR+  PAI +  +   WVY VGP  G  +G+  Y+ +
Sbjct:    9 FWRAIFAEFFATLFYVFFGLGASLRWAPGPLHV--LQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLT--LQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDFL 222          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.096e-20
Identity = 74/233 (31.76%), Postives = 116/233 (49.79%), Query Frame = 1
Query:   22 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAY--DEHRVSKLG-------ASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            +E     F R VIAE +A  L VF++ G+A    +  +E     +G        S+A G+ +  M  +VGH+SGAH+NPAVTL           +  +Y  AQ  GAV A+  L  +   +++    +   SP  S  Q L +EI+VTF ++    AV TD +   +     +A+G +V +  ++A   +G  MNPAR+ G A+ +  +   W++ VGP  G    A  Y+ I
Sbjct:    3 SEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAV-TDRRRHDVSGSVPLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKNFTYHWIFWVGPMIGGAAAAIIYDFI 234          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.043e-20
Identity = 67/225 (29.78%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGA-------SVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA---IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L +F++ GSA    Y        GA       S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A++ L  +   +      +   +P  +  Q L +EI+ T  ++    A  TD +    +G+   +A+G +V +  +LA   +G  +NPAR+ G ++ +  ++  W++ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLA-TTDRRRRRDLGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFI 233          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.280e-20
Identity = 68/231 (29.44%), Postives = 110/231 (47.62%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGS--AALSAYDEHRVSK---LGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGT-TSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGA--WSYNMIRETDKPAH 699
            P  +R  +AE  +T++ VF   GS  A +  Y +   S    L  ++A    +   + A  H+SG H+NPAV+            +   Y  AQL G++ A+L LR++ + ++  G   SP        I+E+V+TF +M+     A D K  A+  +A +A+G  V    ++ GP  G  MNPA   GP++    +   W++ VGP  G  + A  + Y +I     P H
Sbjct:   17 PDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIEPPPHH 247          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.280e-20
Identity = 61/212 (28.77%), Postives = 102/212 (48.11%), Query Frame = 1
Query:   19 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIG-------TTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGP 633
            W   +   F++  + E++ + L +F+ C S   +  D      L  ++A GL + ++I  +G+ISG H NPAV+LA   +       +  Y  +QL G +  +   + +    +          T    G    AL+ EI++T  +       A + K  G LA  ++G AV +  +  GPVSGG MNPAR  GPA+ ++ +   W+Y +GP
Sbjct:   26 WRVSWYERFVQPCLVELLGSALFIFIGCLSVIENGTD---TGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGP 234          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.280e-20
Identity = 72/218 (33.03%), Postives = 109/218 (50.00%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH-------PIKHIGTTSPSGSDLQALIMEIVVTF--SMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA-IASSFYKGIWVYLVGPXTGTFMGAWSY 666
            FL+ V AE +AT + VF   GSA    +     S L  S+A GL +  M  A+G +SG HMNPA+TLA          +   Y  AQL GA++ +  L  L          +  +   + +G   QA++ E+++TF  ++   +S  +  T  +G  A +++G +V +  ++    +G SMNPAR+ GPA I S F    WV+ VGP  G    A  Y
Sbjct:   10 FLKAVFAEFLATLIFVFFGLGSAL--KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLAVNALNNNTTAG---QAVVAEMILTFQLALCVFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSSAHWVFWVGPIVGAATAAIIY 221          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 5.280e-20
Identity = 73/225 (32.44%), Postives = 110/225 (48.89%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKL-----GASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDL-------QALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L VF++ GSA    Y   R   L       S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ AS  L  +   +      S   +DL       Q L +EI+ T  ++    A  TD +   +G  A +A+G +V +  +LA   +G  +NPAR+ G A+ +  +   W++ VGP  G+ +    Y+ I
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLE---NSLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLA-TTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGSALAVLIYDFI 230          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
MIP_MOUSE1.815e-2033.94Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_RABIT2.370e-2034.40Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQP1_CANFA2.370e-2032.00Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
MIP_CAVPO3.096e-2033.94Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQPA_RANES3.096e-2031.76Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_SHEEP4.043e-2029.78Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
TIPA_PHAVU5.280e-2029.44Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
AQP8_HUMAN5.280e-2028.77Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
AQP5_SHEEP5.280e-2033.03Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP1_RAT5.280e-2032.44Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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