DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.896e-20
Identity = 63/226 (27.88%), Postives = 112/226 (49.56%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDL-----QALIMEIVVTFSMMFVTSAVATDTKA-IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNM---IRETDKPAH 699
            R ++AE + T+ LV +  GS  +    ++  +    +   GL+V  +  A GH+SG H+NPAVT+           +   Y  +Q  GA++ +  ++    P   IG    +G D      Q +++E ++TF ++FV   V  + ++ I   A +A+G ++    + A   +G SMNPAR+ GPA+    +   WVY VGP  G  +    Y +   +R+ D+ ++
Sbjct:   24 RMLVAEFLGTFFLVSIGIGST-MGWGGDYAPTMTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAAT-PSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFFKVRKGDEESY 247          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20
Identity = 74/225 (32.89%), Postives = 113/225 (50.22%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSAS-LTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            P  L+  +AE I+T++ VF   GS    AY+  +++  GA+   GLI   + +A           +ISG H+NPAV  AF        + + +Y  AQL G++  S L + V    +   G +   G    AL++EIV+TF +++   A A D K   IG +A IA+G  V    ++ G  +G SMNPA + GPA+ S  +   WVY  GP  G  +    Y ++
Sbjct:   17 PDTLKAGLAEFISTFIFVFAGSGSGI--AYN--KLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVFGAFVGGNITLLRGI-VYIIAQLLGSIVCSALLVFVTASSVPAFGLSEGVGVG-PALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20
Identity = 70/225 (31.11%), Postives = 110/225 (48.89%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            P  +R   AE  +  +++FV  G  +  AY   +++  G +   GL+   + +A           ++SG H+NPAVT       +    +  +Y  AQL GAV A L L+V    ++    +   G +   A++ EIV+TF +++   A A D K   IG +A +A+G  V    ++ G   G SMNPA + GPA+ S  +   WVY VGP  G  + A  Y+ I
Sbjct:   17 PDAIRAAFAEFFS--MVIFVFAGQGSGMAYG--KLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20
Identity = 77/248 (31.05%), Postives = 122/248 (49.19%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHR--------VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVS-ASLTLRVLLHPIKHIG----TTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAI---ASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQARYRS 726
            R +IAE +AT + ++V+   A +  Y   R        V  LG + + G  + V++Y  G +SG H+NPAVTL     R     +  +Y  AQ  GA++ A +   ++  P   +G    T S   S   AL  EIV TF +++ T   ATD K       I  L  + +G AV +  +   P++G  +NPAR++G A+     + +K  W++ VGP  G F+ A +Y+ +    + A A+S  R  S
Sbjct:   44 RALIAEFMATLIFLYVSI--ATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVY-TVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAA-AYHKLVLRGEAAKALSSFRSTS 287          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.176e-19
Identity = 71/226 (31.42%), Postives = 107/226 (47.35%), Query Frame = 1
Query:   10 CLVWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGA-VSASLTLRVLLHPIKH---IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            C +W         R + AE +AT L VF   GS  +  +     S L  ++   L+  + +      SGAH NPAVTLAF    H    +   Y AAQL GA V A+L   V+   I+    I     S S  QA+ +E+++T  ++    A +TD++         +G +V +  ++    +G SMNPAR+ GPAI    +   WV+ VGP  G  + +  YN +
Sbjct:   17 CRLWK-----AISRALFAEFLATGLYVFFGVGS--VMRWPTALPSVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFA-STDSRQTSGSPATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKFTVHWVFWVGPLMGALLASLIYNFV 234          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.176e-19
Identity = 68/225 (30.22%), Postives = 110/225 (48.89%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGA-------SVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG---IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L +F++ GSA    Y        GA       S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A+  L  +   +      +   +P  +  Q L +EI+ T  +  V   +AT  +   +L G   +A+G +V +  +LA   +G  +NPAR+ G ++ +  ++  W++ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGT--LQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFI 232          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19
Identity = 72/230 (31.30%), Postives = 111/230 (48.26%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHR-----VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDL------------QALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +AT L VF++ GSA    Y            +  S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A+  L  +        T+S +G+ L            Q L +EI+ T  ++    A  TD +   +G  A +A+G +V +  +LA   +G  +NPAR+ G A+ +  +   W++ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGI--------TSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFI 230          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 3.422e-19
Identity = 72/225 (32.00%), Postives = 109/225 (48.44%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKL-----GASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDL-------QALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L VF++ GSA    Y   R   L       S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A+  L  +      +   S   +DL       Q L +EI+ T  ++    A  TD +   +G  A +A+G +V +  +LA   +G  +NPAR+ G A+ +  +   W++ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGI---TSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLA-TTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGGALAVLIYDFI 230          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19
Identity = 67/216 (31.02%), Postives = 111/216 (51.39%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-----SDLQALIMEIVVTF--SMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA-SSFYKGIWVYLVGPXTGTFMGAWSY 666
            F + V AE +AT + VF   GSA    +     + L  S+A GL +  +  A+G +SG H+NPA+TLA          +   Y AAQL GA+ A   +   L P+   G  + +      +  +A+++E+++TF  ++   +S  +  T  +G  A +++G +V +  ++    +G SMNPAR+ GPA+  + F    WV+ VGP  G  + A  Y
Sbjct:   10 FFKAVFAEFLATLIFVFFGLGSAL--KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAI-AGAGILYWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAMLAAILY 221          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19
Identity = 60/220 (27.27%), Postives = 111/220 (50.45%), Query Frame = 1
Query:   19 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQ-------ALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGP-XTGTFMG 654
            W E Y    ++  + E++ + L +F+ C S   ++ D      L  ++A GL + ++I  +G+ISG H NPAV+LA   +       +  Y  +Q+ G +  +   +V+    +    +  + + +Q       AL +EI++T  ++      A + K +G LA  ++G +V +  +  G +SG  MNPAR  GPA+ + ++   W+Y +GP   G F+G
Sbjct:   30 WYEQY----IQPCVVELLGSALFIFIGCLSVIENSPD---TGLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAGYWDFHWIYWLGPLLAGLFVG 242          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQP_AEDAE6.896e-2027.88Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP1_MEDSA9.007e-2032.89Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP13_ARATH9.007e-2031.11Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
PIP27_ORYSJ9.007e-2031.05Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
AQP6_HUMAN1.176e-1931.42Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP1_BOVIN1.176e-1930.22Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_HUMAN2.621e-1931.30Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_MOUSE3.422e-1932.00Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP5_RAT4.470e-1931.02Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP8_NOTAL5.838e-1927.27Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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