DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 62/220 (28.18%), Postives = 111/220 (50.45%), Query Frame = 1
Query:   19 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQ-------ALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGP-XTGTFMG 654
            W E Y    ++  + E++ + L +F+ C S   ++ +      L  ++A GL + ++I  +G+ISG H NPAV+LA   V       +  Y  +QL G +  +   +V+    +    +  + + +Q       AL +EIV+T  ++      A + K +G LA  ++G +V +  +  G +SG  MNPAR  GPA+ + ++   W+Y +GP   G F+G
Sbjct:   32 WYEQY----IQPCVVELLGSALFIFIGCLSVIENSPN---TGLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVG 244          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 61/220 (27.73%), Postives = 111/220 (50.45%), Query Frame = 1
Query:   19 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQ-------ALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGP-XTGTFMG 654
            W E Y    ++  I E++ + L +F+ C S   ++ +      L  ++A GL + ++I  +G+ISG H NPAV+LA   +       +  Y  +QL G +  +   +V+    +    +  + + +Q       AL +EI++T  ++      A + K +G LA  ++G +V +  +  G +SG  MNPAR  GPA+ + ++   W+Y +GP   G F+G
Sbjct:   30 WYEQY----VQPCIVELVGSALFIFIGCLSVIENSPN---TGLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVG 242          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 66/216 (30.56%), Postives = 112/216 (51.85%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-----SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELA--GIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA-SSFYKGIWVYLVGPXTGTFMGAWSY 666
            FL+ V AE +AT + VF   GSA    +     + L  ++A GL +  +  A+G +SG H+NPA+TLA          +   Y AAQL GA++ +  L  +  P+   G  + +      +  QA+++E+++TF +     A +TD++    +    +++G +V +  ++    +G SMNPAR+ GPA+  + F    WV+ VGP  G  + A  Y
Sbjct:   10 FLKAVFAEFLATLIFVFFGLGSAL--KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVA-PLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFA-STDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILY 221          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.699e-18
Identity = 66/215 (30.70%), Postives = 110/215 (51.16%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTF--SMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA-SSFYKGIWVYLVGPXTGTFMGAWSY 666
            F + V AE +AT + VF   GSA    +     + L  S+A GL +  +  A+G +SG H+NPA+TLA          +   Y AAQL GA++ +  L  L          +   S + +  +A+++E+++TF  ++   +S  +  T  +G  A +++G +V +  ++    +G SMNPAR+ GPA+  + F    WV+ VGP  G  + A  Y
Sbjct:   10 FFKAVFAEFLATLIFVFFGLGSAL--KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAVLAAILY 221          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 2.218e-18
Identity = 69/222 (31.08%), Postives = 108/222 (48.65%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHR-----VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTTSPSG--SDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R V+AE +A  L VF++ GSA    Y            +  S+A GL +  +  +VGHISGAH+NPAVTL           +  +Y  AQ  GA+ A+  L  +    P   +G    +   +  Q L +EI+ T  ++    A  TD +   +G  A +A+G +V +  +LA   +G  +NPAR+ G A+ +  +   W++ VGP  G  +    Y+ I
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFI 230          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 75/248 (30.24%), Postives = 116/248 (46.77%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAG-----GLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL---HPIKHIGTTSPSGSDLQA---LIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAI-----ASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQARYRS 726
            R  IAE  AT LLV   C S +    ++ +  + GA V G     G ++ V++Y    ISG HMNPAVT A    R     +  +Y  AQ  GAV  +   R +       +H G  +   +   A   ++ E+V TF +++ T   ATD K       +  LA + +G AV +  +   P++G  +NPAR++GPA+      +  +  +W++ VGP  G    A  Y+        A A + + YRS
Sbjct:   35 RAAIAEFTATLLLV---CISVSTVIGEKRQSGEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVY-TVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGA-AAAMIYHHYILRGAAAKAFASSSYRS 277          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTL----RVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGE--LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNM 672
            F R ++AE + + L   +  G++   A   H V  LG+++A GL    ++ A+GH+SG H+NPA+TLAF         +   Y  AQL GA++ +  L       +     +    PS    Q  ++E+++T   +    A + D +  G    A + VG ++ +  +   P +G  MNPAR+  PA+ +  +   WV+  GP  G  + A  Y +
Sbjct:    9 FWRAILAEFLGSLLYTLLGLGASLRWAPGPHGV--LGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFA-SFDDRHDGRPGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHWVFWAGPLLGAALAALLYEL 221          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.784e-18
Identity = 72/234 (30.77%), Postives = 108/234 (46.15%), Query Frame = 1
Query:    7 LCLVWNEHYPPGFLRKVIAEIIATYLLVFVTCGS---AALSAYDE--HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIG----------ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGA 657
            +C      + P  LR   AE  +T+L VF+  GS   A +   DE     S +  +VA    +   ++    +SG H+NPAVT A+A   H        Y A+Q+ G+  A L L  +    + + TT  +   +   A I+E V+TF +++ T  VA D +  G           L  + VG+      + AG ++G SMNPAR+ GPA+ S  Y    VY  GP  G  + A
Sbjct:    4 ICANMKRCFSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAG-QAVPTTRIAVEMTGFGAGILEGVLTFMVVY-TVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAA 235          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.784e-18
Identity = 66/213 (30.99%), Postives = 102/213 (47.89%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGA-VSASLTLRVLLHPIKH---IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            + + AE +AT L VF   GS     +     S L  ++   L     +      SGAH NPAVTLA+    H    +   Y AAQL GA V A+L   V    ++    +     S S  QA+ +E+V+T  ++    A     + +G  A + +G++V +  ++    +G SMNPAR+ GPA+    +   W++ VGP TG  + +  YN I
Sbjct:   22 KALFAEFLATGLYVFFGVGSVL--PWPVALPSVLQVAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNFI 231          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.455e-18
Identity = 65/215 (30.23%), Postives = 112/215 (52.09%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTF--SMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA-SSFYKGIWVYLVGPXTGTFMGAWSY 666
            FL+ V AE +AT  L+FV  G A+   +     + L  ++A GL +  +  A+G +SG H+NPA+TLA          +   Y  AQL GA++ +  L  L          + + + + +  QA+++E+++TF  ++   +S  +  T  +G  A +++G +V +  ++    +G SMNPAR+ GPA+  + F    WV+ VGP  G  + A  Y
Sbjct:   10 FLKAVFAEFLAT--LIFVFFGLASALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAAVAAILY 221          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQP8_RAT9.958e-1928.18Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
AQP8_MOUSE9.958e-1927.73Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP5_HUMAN9.958e-1930.56Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP5_MOUSE1.699e-1830.70Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP1_PONAB2.218e-1831.08Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
PIP28_ORYSJ2.897e-1830.24Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
MIP_CHICK2.897e-1828.24Lens fiber major intrinsic protein OS=Gallus gallu... [more]
TIP51_ORYSJ3.784e-1830.77Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQP6_RAT3.784e-1830.99Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
AQP5_PIG6.455e-1830.23Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
back to top