DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.430e-18
Identity = 69/232 (29.74%), Postives = 104/232 (44.83%), Query Frame = 1
Query:   58 IAEIIATYLLVFVTCGSAA---LSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQA-------------LIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA----------SSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            +AE + T LL+ +  G  A   L     H    +  +   GL V + +Y VG ISGAH+NPAVT+  A +  FPW +VP Y  +Q+ GA   ++   V L  + H   T    + L               L+ EI+ T  ++     +  +  A G L  + VG  V    +  G  +G ++NPAR  GP +A           S +   WV ++GP  G  +GA  YN +
Sbjct:    5 LAEFLGTMLLIILGDGVVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAIL--VYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLADG-LNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGASLYNWL 233          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.101e-17
Identity = 76/232 (32.76%), Postives = 109/232 (46.98%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVAT--------DTK---AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            LR  +AE I+T+L VF   GSA +SA      +    S AG L+ T +  A G          +SG H+NPAVT A+A            Y A+QL GA  A L+L  L    + + TT  + + +     ++E V+TF +++    V          D K   A   L  +AVG       + AG ++G SMNPAR+ GPA+ S  +K   VY  GP  G  + A  Y ++
Sbjct:   19 LRSYLAEFISTFLFVFTAVGSA-ISA--RMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLN-LFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFKNQAVYWAGPMVGAAVAALVYQIM 246          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.203e-17
Identity = 71/224 (31.70%), Postives = 105/224 (46.88%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHR-----VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAV-SASLTLRVLLHPIKHIG----TTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG---IWVYLVGPXTGTFMGA 657
            F R +IAE IAT L ++VT   A +  +         V  LG + A G ++ V++Y    ISG H+NPAVT      R     +   Y  AQ  GA+    L    ++ P K +G    T +   S   AL  EI+ TF +++ T   ATD K       +  LA + +G AV +  +   P++G  +NPAR+ G A+  +  K     W++ VGP  G    A
Sbjct:   34 FYRAIIAEFIATLLFLYVTV--ATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAA 254          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 65/213 (30.52%), Postives = 101/213 (47.42%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVS-ASLTLRVLLHPIKH---IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            + + AE +AT L VF   GS     +     S L  ++   L     +      SGAH NPAVTLA+    H    +   Y AAQL GA + A+L   V    I+    +     S S  QA+ +E+V+T  ++    A     + +   A + +G++V +  ++    +G SMNPAR+ GPA+    +   W++ VGP TG  + +  YN I
Sbjct:   22 KALFAEFLATGLYVFFGVGSVL--PWPVALPSVLQIAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNFI 231          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.076e-16
Identity = 61/214 (28.50%), Postives = 101/214 (47.20%), Query Frame = 1
Query:   61 AEIIATYLLVFVTCGS--AALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGT----TSPSGSDLQALIMEIVVTFSMMFV---TSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            +E + T  LV+   GS  AA +   +     L   +  G+ +  +I+AV  +SG ++NPAVTLA              Y AAQ+ G ++ +  L   L  +  I       +P  +  QA +ME+++T  +      TS      + +  +A  A+G A+ I   +    SGG++NP R +GP+I S  +   WVY +GP  G  + A+ Y  +
Sbjct:   39 SEFLGTLYLVYFCGGSVCAAFAVAGDSAARALLGGLIQGMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMYRIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTSVFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSIISGVWSHHWVYWLGPIVGAILAAFIYRCL 252          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP7_MOUSE (Aquaporin-7 OS=Mus musculus GN=Aqp7 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.076e-16
Identity = 68/240 (28.33%), Postives = 109/240 (45.42%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH-PIKHIG------TTSPSGSDLQALIMEIVVTFSMMFVTSA-----------VATDTKAIGELAG---IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG------------IWVYLVGPXTGTFMGAWSY 666
            +R+ +AE ++TY+++    GS A     E+  S LG ++  G  VT+ ++  G ISGAHMN AVT    A+    WK+ P+Y   Q  G+ SA+ T  ++ +  I H        T S + +++ A  +   +T    F+  A             TD K    L G   + +G  V +  V  G  SG ++NP+R + P +  +F  G             WV +V P  G ++G   Y
Sbjct:   19 VREFLAEFLSTYVMMVFGLGSVAHMVLGENSGSYLGVNLGFGFGVTMGVHVAGGISGAHMNAAVTFTNCALGRMTWKKFPVYVLGQFLGSFSAAATTYLIFYGAINHFAGGDLLVTGSKATANIFATYLPEYMTLWRGFLDEAFVTGMLQLCLFAITDKKNSPALQGTEPLVIGILVTVLGVSLGMNSGYAINPSRDLPPRL-FTFIAGWGKQVFRAGNNWWWVPVVAPLLGAYLGGIVY 257          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP10_HUMAN (Aquaporin-10 OS=Homo sapiens GN=AQP10 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.076e-16
Identity = 71/265 (26.79%), Postives = 117/265 (44.15%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYD-EHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI------KHIGTTSPSGS------------DLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG---IAVGSAVCITSVLAGPVSGGSMNPARTV-----------GPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI-----RETDKPAHAISQARYRST 729
            R+ +AE +  ++L+ +T G+ A +    E + +     +AG L VT+ IY  G++SGAH+NPA +LA   V   PW ++PIY   QL  A  AS    VL H         ++  T P  +             L    ++ V+   M+ V      D +  G  AG   + VG  +    +  G   G  +NPAR +           GP + S+     WV +V P  G  +G  +Y ++      E  +PA  +  A+++++
Sbjct:   22 RQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILALGLSMGANCGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATYQLLVALHHPEGPEPAQDLVSAQHKAS 286          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.542e-16
Identity = 67/218 (30.73%), Postives = 100/218 (45.87%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGAS-VAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALI------MEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R +I+E +A+++ VF+ CG+AA         S L A+ +A GL +  +     HISGAH+NPAVTLA   VR     +  +Y  AQ  G ++ +  L  +  P  + G    + S   AL       +E ++TF    V       T  + +  G +  S  C  S     VS   +NPAR++GP+   + +   WVY  GP  G       Y  I
Sbjct:   64 FWRSIISECLASFMYVFIVCGAAAGVGVGASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVP-GYQGNLQAAISHSAALAAWERFGVEFILTF---LVVLCYFVSTDPMKKFMGNSAASIGCAYSACCF-VSMPYLNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYI 276          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP7_RAT (Aquaporin-7 OS=Rattus norvegicus GN=Aqp7 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.542e-16
Identity = 65/240 (27.08%), Postives = 106/240 (44.17%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGA-VSASLTLRVLLHPIKHIG-----TTSPSGSD-------------LQALIMEIVVTFSMMFVTSAVA--TDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTV-----------GPAIASSFYKGIWVYLVGPXTGTFMGAWSY 666
            ++R+ +AE ++TY+L+    GS A     E   S LG ++  G  VT+ I+  G ISGAHMN AVT    A+    WK+ PIY   Q  G+ ++A+ T  +    I H        T P  +               +  + E+ VT  +     A+    ++ A+     + +G  VC+  V  G  +G ++NP+R +           G  + S+     WV +V P  G ++G   Y
Sbjct:   17 WVREFLAEFLSTYVLMVFGLGSVAHMVLGERLGSYLGVNLGFGFGVTMGIHVAGGISGAHMNAAVTFTNCALGRMAWKKFPIYVLGQFLGSFLAAATTYLIFYGAINHYAGGELLVTGPKSTANIFATYLPEHMTLWRGFVDEVFVTGMLQLCIFAITDKLNSPALQGTEPLMIGILVCVLGVSLGMNTGYAINPSRDLPPRFFTFIAGWGKKVFSAGNNWWWVPVVAPLLGAYLGGIVY 256          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP9_HUMAN (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.626e-16
Identity = 65/249 (26.10%), Postives = 114/249 (45.78%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSK-LGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTL--------------RVLL---HPIKHIGTTSPSG--SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG---IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS--------FYKG---IWVYLVGPXTGTFMGAWSYNMIRETDKP 693
            ++ ++E + T++L+ + CG  A +     R    +  +V   + V + IY  G +SG H+NPAV+LA        W ++P Y  AQ  GA   + T+              ++L+   +   HI  T P+   S   A   ++V T  ++ +  A+  D++ +G   G   IA+G  + + +   G  SG +MNPAR + P + ++        F  G    W+ +VGP  G  +G   Y ++ E   P
Sbjct:   24 KETLSEFLGTFILIVLGCGCVAQAILSRGRFGGVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAI-FDSRNLGAPRGLEPIAIGLLIIVIASSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFWWIPVVGPLVGAVIGGLIYVLVIEIHHP 271          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
GLPF_THEMA8.430e-1829.74Probable glycerol uptake facilitator protein OS=Th... [more]
TIP51_MAIZE1.101e-1732.76Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
PIP28_ARATH3.203e-1731.70Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
AQP6_MOUSE5.464e-1730.52Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
AQPA_DICDI2.076e-1628.50Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
AQP7_MOUSE2.076e-1628.33Aquaporin-7 OS=Mus musculus GN=Aqp7 PE=2 SV=1[more]
AQP10_HUMAN2.076e-1626.79Aquaporin-10 OS=Homo sapiens GN=AQP10 PE=2 SV=2[more]
BIB_DROME3.542e-1630.73Neurogenic protein big brain OS=Drosophila melanog... [more]
AQP7_RAT3.542e-1627.08Aquaporin-7 OS=Rattus norvegicus GN=Aqp7 PE=2 SV=2[more]
AQP9_HUMAN4.626e-1626.10Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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