DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.679e-15
Identity = 63/218 (28.90%), Postives = 99/218 (45.41%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAA----LSAYD-EHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG--SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG-IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            LR  ++E I+T+  V    GS      L A D       L  ++A  L ++  +Y   ++SG H+NPAVT A A            Y  +Q+  +V A L L+V +   +H+     +G  +   A ++E V+ F +++     +   + +    G I +G       + AGP SGGSMNPA   G A+    +K   VY VGP  G    A  Y+ +
Sbjct:   22 LRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVME-QHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVFTASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYDNV 238          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.679e-15
Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSA---------ALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP-IKHIGTTSPSGSDLQAL----IMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG---IWVYLVGPXTGTFMGAWSYNMI 675
            F R +IAE IAT L ++VT  +          AL+      V  LG + A G ++ +++Y    ISG H+NPAVT      R     +  +Y  AQ  GA+     ++          G  +   SD  ++      EI+ TF +++ T   ATD K       +  LA + +G AV I  +   P++G  +NPAR++G AI  +  K     W++ VGP  G  + A+ +  +
Sbjct:   36 FYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFV 268          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP7_HUMAN (Aquaporin-7 OS=Homo sapiens GN=AQP7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.679e-15
Identity = 64/239 (26.78%), Postives = 106/239 (44.35%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH---------------PIKHIG---TTSPSGSDL-QALIMEIVVTFSMMFVTSAVA--TDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAI-----------ASSFYKGIWVYLVGPXTGTFMGAWSY 666
            +R+ +AE ++TY+++    GS A    ++   S LG ++  G  VT+ ++  G ISGAHMN AVT A  A+   PW++ P+Y   Q  G+  A+ T+  L +               P+   G   T  P    L +  + E  +T  +     A+    +  A+     + +G  V I  V  G  +G ++NP+R + P I            S+     WV +V P  G ++G   Y
Sbjct:   34 VREFLAEFMSTYVMMVFGLGSVAHMVLNKKYGSYLGVNLGFGFGVTMGVHVAGRISGAHMNAAVTFANCALGRVPWRKFPVYVLGQFLGSFLAAATIYSLFYTAILHFSGGQLMVTGPVATAGIFATYLPDHMTLWRGFLNEAWLTGMLQLCLFAITDQENNPALPGTEALVIGILVVIIGVSLGMNTGYAINPSRDLPPRIFTFIAGWGKQVFSNGENWWWVPVVAPLLGAYLGGIIY 272          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.724e-15
Identity = 70/224 (31.25%), Postives = 105/224 (46.88%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHR-----VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH-PIKHIG----TTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG---IWVYLVGPXTGTFMGA 657
            F R +IAE IAT L ++VT   A +  + +       V  LG + A G ++ V++Y    ISG H+NPAVT      R     +   Y  AQ  GA+     ++  +  P   +G    T +   S   AL  EI+ TF +++ T   ATD K       I  LA + +G AV +  +   P++G  +NPAR+ G A+  +  K     W++ VGP  G    A
Sbjct:   36 FYRALIAEFIATLLFLYVTV--ATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAA 256          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.724e-15
Identity = 66/234 (28.21%), Postives = 106/234 (45.30%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGS---------AALSAYDEH--RVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH-----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA---SSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            R VIAE IAT L +++T  +         A+ S  D     V  LG + A G ++ +++Y    ISG H+NPAVT      R     +  +Y  AQ  GA+     ++       +       T +   S    L  EI+ TF +++ T   ATD K       +  LA + +G AV +  +   P++G  +NPAR++G A+       +   W++ VGP  G  + A+ +  I
Sbjct:   42 RAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYI 274          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.724e-15
Identity = 63/229 (27.51%), Postives = 103/229 (44.98%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLG----ASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH-----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA---SSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R  IAE +AT+L ++VT  +    +    +   +G    A   GG+I   ++Y    +SG H+NPAVT      R     +   Y   Q  GAV  +  ++     +           SP  +    L  E+V TF +++ T   ATD K       +  LA + +G AV +  +   P++G  +NPAR++G AI       + G W++ VGP  G  + A  + ++
Sbjct:   58 FYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFA-LVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVY-TVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVV 284          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14
Identity = 71/242 (29.34%), Postives = 101/242 (41.74%), Query Frame = 1
Query:   58 IAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVL----------LHPIKH--------IGTTS----PSGSDLQALIMEIVVTFSMMFVTSAVATDTKAI--GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIW---------------VYLVGPXTGTFMGAWSY 666
            I E + T LL+F   G  A              S+  G+ V + +YA   +SGAH+NPAVT+A      F  K+V  Y  +Q+ GA  A+  +  L          +H I           GT S    PS S   A  +E V+T  +M +  A+  D   +  G LA + +G  + +     GP++G +MNPAR  GP   +  Y   W               V +V P  G   GAW Y
Sbjct:   10 IGEFLGTALLIFFGVGCVAALKVAGASFGLWEISIMWGMGVALAVYATAGLSGAHLNPAVTIALWKFACFDGKKVIPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALIMALTDDGNGVPRGPLAPLLIGILIAVIGGAMGPLTGFAMNPARDFGPKFFA--YLAGWGELALTGGREIPYFIVPMVAPVLGALAGAWLY 249          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP3_MOUSE (Aquaporin-3 OS=Mus musculus GN=Aqp3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14
Identity = 71/243 (29.22%), Postives = 109/243 (44.86%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSK-LGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGA-VSASLTLRVLLHPI-----KHIGTTSPSG-----SDLQALIMEIVVTFSMMFV-TSAVATDTKAIGE---------LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS--------FYKG---IWVYLVGPXTGTFMGAWSYNMI 675
            LR+ +AE + T +LV   CGS A            L  ++A G  VT+ I   G +SGAH+NPAVT A   +   PW ++PIYA AQ  GA + A +   +    I       +  + P+G     +   +  +++V  F   F+ T+A+     AI +         L    VG  V +     G  SG ++NPAR  GP + ++        F  G    WV +V P  G+  G + Y ++
Sbjct:   22 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYALAQTLGAFLGAGIVFGLYYDAIWAFANNELFVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTAALIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTALAGWGSEVFTTGRHWWWVPIVSPLLGSIAGVFVYQLM 264          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.488e-14
Identity = 66/237 (27.85%), Postives = 109/237 (45.99%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGS---------AALSAYDE--HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI--------KHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA---SSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            R VIAE +AT L +++T  +         A+ S  D     V  LG + A G ++ +++Y    ISG H+NPAVT      R     +  +Y AAQ  GA+     ++                +     +G+ L A   EI+ TF +++ T   ATD K       +  LA + +G AV +  +   P++G  +NPAR++G A+    S  +   W++ VGP  G  + A  + ++
Sbjct:   41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAA---EIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIV 273          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.943e-14
Identity = 66/229 (28.82%), Postives = 102/229 (44.54%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSK------------LGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH-----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA---SSFYKGIWVYLVGPXTGTFMGA 657
            R  IAE IAT L +++T     +  Y     +K            LG + A G ++ +++Y    ISG H+NPAVT      R     +  +Y  AQ  GA+  +   +       +     + T S   +   AL  EI+ TF +++ T   ATD K       +  LA + +G AV +  +   PV+G  +NPAR+ GPA+       +   W+Y VGP  G  + A
Sbjct:   40 RAAIAEFIATLLFLYITV--LTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAA 265          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIP51_ARATH6.679e-1528.90Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH6.679e-1529.06Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
AQP7_HUMAN6.679e-1526.78Aquaporin-7 OS=Homo sapiens GN=AQP7 PE=2 SV=1[more]
PIP27_ARATH8.724e-1531.25Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP21_ORYSJ8.724e-1528.21Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE8.724e-1527.51Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
GLPF_HAEIN1.139e-1429.34Glycerol uptake facilitator protein OS=Haemophilus... [more]
AQP3_MOUSE1.139e-1429.22Aquaporin-3 OS=Mus musculus GN=Aqp3 PE=2 SV=1[more]
PIP26_MAIZE1.488e-1427.85Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP27_MAIZE1.943e-1428.82Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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