DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.596e-51
Identity = 96/216 (44.44%), Postives = 141/216 (65.28%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG--SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDK 690
            RK+ AE + T++L+F    +  ++      +S  G +   GL V  +I + GHISGAH+NP++T+AFAA+RHFPW QVP Y A Q   +V A+  L+ + HP    G T P    S  QA   E +++F+++FV +AVATDT+A+GELAGIAVG+AV +  ++AGP +GGSMNP RT+GPA+A+  Y+ +W+YL+ P  G   GA  Y  ++  D+
Sbjct:   74 RKLGAEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACAGLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVFHPFLSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYKAVKLRDE 289          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP21_ARATH (Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.971e-47
Identity = 94/219 (42.92%), Postives = 138/219 (63.01%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGT--------TSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            FL+K++AE++ TY L+F  C + A++A   H V+ +G +V  G+++ V++Y +GH+S AH NPAVTLA A+ + FP  QVP Y   Q+ G+  AS TLR+L      + +        +SPSGSDLQA +ME ++T  +M V  AV T  +   EL G+ +G+ V +  + AG VSG SMNPAR++GPA+    YKGIW+YL+ P  G   GA  + M+
Sbjct:   46 FLQKLLAELVGTYYLIFAGCAAIAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLS-AHFNPAVTLALASSQRFPLNQVPAYITVQVIGSTLASATLRLLFDLNNDVCSKKHDVFLGSSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKRTTEELEGLIIGATVTLNVIFAGEVSGASMNPARSIGPALVWGCYKGIWIYLLAPTLGAVSGALIHKML 263          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.693e-40
Identity = 83/229 (36.24%), Postives = 136/229 (59.39%), Query Frame = 1
Query:   10 CLVWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAV-ATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKP 693
            CL ++    P  LR V+AE++ T++L+F  CG  + +      V  L  +V  GL V V++Y++GHISGAH+NP++T+AFA    FPW QVP+Y  AQ  GA +A+L    +      I  T P+ S + A  +E++ T  ++F+ SA+     + +G L G  +G+ + +  ++ GP+SGGSMNPAR++GPA+ +  ++ +W+Y+  P  G  +G  +Y  I    +P
Sbjct:   35 CLPYDIDLNP--LRIVMAELVGTFILMFSVCGVISSTQLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVYGVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQNLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTYRSISLKTRP 261          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.517e-40
Identity = 81/211 (38.39%), Postives = 129/211 (61.14%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIR 678
            L+KV AE   T++L+F    +  +    +   + LG + + GL VTV++ ++ HISG H+NPA+++A A   H P   +  Y ++Q+ GAV+AS  ++ L HP+     T P+   ++A  +E ++TF ++F+ +A+ATD  A+ EL  +AVG+ V +  ++AGP +G SMNPART+G AIA+  Y  IWVYLV    G   G  +Y  I+
Sbjct:   67 LKKVSAEFFGTFILIFTVLSTIIMDEQHKSIETLLGIATSAGLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGLYHPVNPGIVTVPNVGTVEAFFVEFIITFFLLFIITALATDPNAVKELIAVAVGATVMMNILVAGPSTGASMNPARTIGAAIATGRYTQIWVYLVATPLGAIAGTGAYVAIK 277          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.746e-39
Identity = 82/215 (38.14%), Postives = 127/215 (59.07%), Query Frame = 1
Query:   34 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIR 678
            P   ++KV AE   T+ L+F    +  +    +   S LG + + GL VTV++ ++ HISG H+NPAV++A     H P   +  Y AAQ+ G+++AS  ++ + HP+     T P    ++A  +E V TF ++F+ +A+ATD  A+ EL  +AVG+ + + +++AGP +G SMNPART+GPAIA+  Y  IWVYLV    G   G   Y  I+
Sbjct:   90 PVPLVKKVGAEFFGTFTLIFTVLSTIIMDEQHKGVESLLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIVTVPKVGTVEAFFLEFVTTFVLLFIITALATDPNAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLVATPLGAVAGEGFYFAIK 304          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP41_ORYSJ (Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33
Identity = 85/219 (38.81%), Postives = 129/219 (58.90%), Query Frame = 1
Query:   40 GFL-RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFP-WKQVPIYAAAQLTGAVSASLTLRVLLHPIK-HIGTTSP---SGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIR 678
            GFL R+V+ E +A++L+VF +C +A +    +     L   +   ++   + + +  +  AH NPAVT+ FAA R FP W ++P+Y AAQL G++ A L++  ++ P   H   T+P    G+ L  L ME + +  +M V + VATD  A   + GIA+G+AV    ++ GPVSGGSMNPART+GPAI    Y G+W+Y+V P  G  +GA     +R
Sbjct:   53 GFLIREVMVEGLASFLVVFWSCVAALM----QEMYGTLTFPMVCLVVAMTVAFVLSWLGPAHFNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGTRLPFL-MEFLASAVLMIVIATVATDGTAGKTVGGIAIGAAVGGLGLVIGPVSGGSMNPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVR 266          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 82/209 (39.23%), Postives = 113/209 (54.07%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAY----DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL--HPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK-AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            PG LR V+AE++ T+L VF   GSA  +A      +  +     + A  L+V VM+ A  H+SG H+NPAVTL  AA  H    +  +YAAAQL G+  A L L  L        +   +P     +A+ ME V+TFS++F   A   D + A+G L  + VG  V    +  GP SG SMNPAR+ GPA+A+  +   W+Y VGP  G
Sbjct:   15 PGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIG 223          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29
Identity = 84/211 (39.81%), Postives = 118/211 (55.92%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYA---------VGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            L+  +AE IAT L VF   GSA   AY +  ++K GA    GL+   + +A           +ISG H+NPAVT   A   H       +Y  AQL GA  A   L+ + H  + I T   SG S+++ ++MEIV+TF++++   A A D K  ++G +A +A+G  V    + AGP SGGSMNPAR+ GPA+A+  + G WVY VGP  G
Sbjct:   18 LKAYVAEFIATLLFVFAGVGSAI--AYSQ--LTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHG-QAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVG 223          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29
Identity = 81/221 (36.65%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   61 AEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI------------KHIGTTSPSGSDLQ-ALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            AE   T+ LV   CGSA L+A   +  +   G ++A GL V  M YAVGHISG H NPAVT+  AA   F W+ VP Y  AQ+ GA+ A+ TL  +   +               G  SP    +Q ALI EIV++   +FV    ATD +A    A I +G A+ +  +++ PV+  S+NPAR+ GPA  +     + +W++ + P  G  +GA +Y ++
Sbjct:   10 AEFFGTFWLVLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILG-ATDKRAPAGFAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29
Identity = 81/221 (36.65%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   61 AEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI------------KHIGTTSPSGSDLQ-ALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            AE   T+ LV   CGSA L+A   +  +   G ++A GL V  M YAVGHISG H NPAVT+  AA   F W+ VP Y  AQ+ GA+ A+ TL  +   +               G  SP    +Q ALI EIV++   +FV    ATD +A    A I +G A+ +  +++ PV+  S+NPAR+ GPA  +     + +W++ + P  G  +GA +Y ++
Sbjct:   10 AEFFGTFWLVLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILG-ATDKRAPAGFAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
NIP31_MAIZE2.596e-5144.44Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]
NIP21_ARATH2.971e-4742.92Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1... [more]
NIP71_ARATH2.693e-4036.24Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP33_ORYSJ3.517e-4038.39Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica G... [more]
NIP32_ORYSJ1.746e-3938.14Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
NIP41_ORYSJ7.103e-3338.81Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica G... [more]
TIP43_ORYSJ1.934e-3039.23Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP23_MAIZE3.648e-2939.81Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQPZ_BORPA3.648e-2936.65Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR3.648e-2936.65Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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