DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.939e-22
Identity = 70/219 (31.96%), Postives = 110/219 (50.23%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAAL--SAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP--IKHIGTTSPSG--SDLQALIMEIVVTFSMMFV--TSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F + V AE +A  + V ++ GS      A     V  +  S+  GL +  M+   GHISG H+NPAVT+A    R     +   Y AAQ  GA+  +  L ++  P  +  +G T+  G  S    L++E+++TF ++F    S  +  T   G +A +A+G +V I  + A   +G SMNPAR+ GPA+    ++  W+Y VGP  G  +    Y  +
Sbjct:   34 FWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.532e-22
Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGS--DLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKP 693
            P   +  +AE I+T  L+FV  GS +  A+   +++  GA+   GLI   + +A+          +ISG H+NPAVT       +    +  +Y  AQL G+V A L L++       +G  S S     + A+++E+V+TF +++   A A D K   +G +A IA+G  V    +  G   G SMNPA + GPA+ +  ++  WVY VGP  G  + A  Y++I    +P
Sbjct:   17 PDTAKAAVAEFIST--LIFVFAGSGSGMAFS--KLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAA-LGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDIIFIGQRP 243          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.307e-22
Identity = 75/229 (32.75%), Postives = 115/229 (50.22%), Query Frame = 1
Query:   25 EHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDL-QALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            E Y PG L+  +AE I+T + VF   GS    +    +++  GA+   GLI   + +A           +ISG H+NPAVT       +    +  +Y  AQL G+  A   LR     +   GT   +G  + +AL++EIV+TF +++   A A D K  ++G +A IA+G  V    ++ G   G SMNPA + GPA+ S  ++  WVY VGP  G  +    Y ++
Sbjct:   13 EVYHPGALKAALAEFISTLIFVFAGQGSGMAFS----KLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLA-TGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 1
Query:   16 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHR--VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP--IKHIGTTSPSGSDL--QALIMEIVVTFSMMFV--TSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            VW +     F + V AE +A  + V ++ GS       E+   V  +  S+  GL +  M+   GHISG H+NPAVT+A    R     +   Y  AQ  GA+  +  L ++  P  +  +G T+  G+      L++E+++TF ++F    S  +  T   G +A +A+G +V I  + A   +G SMNPAR+ GPA+    ++  W+Y VGP  G  +    Y  +
Sbjct:   32 VWTQ----AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYV 254          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 71/228 (31.14%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   16 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHR--VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP--IKHIGTTSPSGSDL--QALIMEIVVTFSMMFV--TSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            VW +     F + V AE +A  + V ++ GS       E    V  +  S+  GL +  M+   GHISG H+NPAVT+A    R     +   Y AAQ  GA+  +  L ++  P  +  +G T   G+      L++E+++TF ++F    S  +  T   G +A +A+G +V I  + A   +G SMNPAR+ GPA+    ++  W+Y VGP  G  +    Y  +
Sbjct:   29 VWTQ----AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 1
Query:   16 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHR--VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP--IKHIGTTSPSGSDL--QALIMEIVVTFSMMFV--TSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            VW +     F + V AE +A  + V ++ GS       E+   V  +  S+  GL +  M+   GHISG H+NPAVT+A    R     +   Y  AQ  GA+  +  L ++  P  +  +G T+  G+      L++E+++TF ++F    S  +  T   G +A +A+G +V I  + A   +G SMNPAR+ GPA+    ++  W+Y VGP  G  +    Y  +
Sbjct:   29 VWTQ----AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYV 251          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 71/228 (31.14%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   16 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHR--VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP--IKHIGTTSPSGSDL--QALIMEIVVTFSMMFV--TSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            VW +     F + V AE +AT + V +  GS       E+   V  +  S+  GL +  M+   GHISG H+NPAVT+A    R     +   Y  AQ  GA+  +  L ++  P  +  +G T+  G+      L++E+++TF ++F    S  +  T   G +A +A+G +V I  + A   +G SMNPAR+ GPA+    +   W+Y VGP  G  +    Y  +
Sbjct:   29 VWTQ----AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 73/230 (31.74%), Postives = 107/230 (46.52%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGA----SVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGA--WSYNMIRETDKPAH 699
            P  +R  I+E +AT + VF   GS          +S  G     S+A  L + V +    +ISG H+NPA+T            +   Y  AQL GAV A+L LR+    ++  G    SG  D  A+++E  +TF +M+   A   D K   +G +A +AVG  +    +  GP  G  MNPAR  GPA+    ++  WVY +GP  G  +    + Y +I   D   H
Sbjct:   23 PDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSADAAPH 252          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 76/218 (34.86%), Postives = 108/218 (49.54%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVAT-DTKAIGELAGI--AVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            F R + AE  A+   VF   G++   A     V  L  ++A GL +  ++ AVGHISGAH+NPAVT AF         +   Y  AQL GAV+ +  L  +  P       + T  P  S  QA I+EI +T  + FV    AT D +  G L  +  AVG ++ +  +     +G  MNPAR+  PAI +  +   WVY VGP  G  +G+  Y+ +
Sbjct:    9 FWRAICAEFFASLFYVFFGLGASLRWAPGPLHV--LQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLT--LQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFL 222          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 72/223 (32.29%), Postives = 109/223 (48.88%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL----------HPIKHIGTTSPSGSDL-QALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            RK+  E + T+ LV   CGSA L+A + E  +  LG S A GL V  M YAVG ISG H NPAV++  A     P   +  Y  AQ+TGA++A+  L V+                 G  SP G  L  AL+ E+V+T   + +          +G  A IA+G  + +  +++ PV+  S+NPAR+ G A  +       +W++ V P  G  +    + ++
Sbjct:    3 RKLSVEFLGTFWLVLGGCGSAVLAAAFPEVGIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGSTHSRVPVG-FAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQALFVGDWAISQLWLFWVAPLIGAVIAGIVWKIV 224          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQP4_BOVIN1.939e-2231.96Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
TIP12_MAIZE2.532e-2231.90Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP11_ORYSJ3.307e-2232.75Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQP4_NOTAL4.319e-2230.70Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_HUMAN4.319e-2231.14Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_RAT5.641e-2230.70Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_MOUSE5.641e-2231.14Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
TIP31_ORYSJ7.368e-2231.74Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
MIP_BOVIN7.368e-2234.86Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQPZ1_RHIME7.368e-2232.29Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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