DC900103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: HINT1_MOUSE (Histidine triad nucleotide-binding protein 1 OS=Mus musculus GN=Hint1 PE=1 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31 Identity = 67/129 (51.94%), Postives = 89/129 (68.99%), Query Frame = -3 Query: 202 MASXNEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVXLLGGRQMNWPPG 588 MA A A P TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S A++ +LG L+ K A GL+ G+R+V+N+G +GGQSV+HIH+ +LGGRQMNWPPG Sbjct: 1 MADEIAKAQVAQPGGD-TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: HINT1_PONAB (Histidine triad nucleotide-binding protein 1 OS=Pongo abelii GN=HINT1 PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30 Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 202 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVXLLGGRQMNWPPG 537 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S AE+ + +LG L+ K A GL G+R+V+N+G +GGQSV+H+H+ +LGGRQM+WPPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: HINT1_HUMAN (Histidine triad nucleotide-binding protein 1 OS=Homo sapiens GN=HINT1 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.536e-30 Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = -3 Query: 202 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVXLLGGRQMNWPPG 537 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S AE+ +LG L+ K A GL G+R+V+N+G +GGQSV+H+H+ +LGGRQM+WPPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: YHIT_SYNY3 (Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp. (strain PCC 6803) GN=slr1234 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.539e-27 Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = -3 Query: 202 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVXLLGGRQMNWPPG 537 TIF KII +EIP+ +VYEDD LAF+D++PQAP H+L+IPK L LS A +LG LL AK VA G+ D FR+VIN+G GQ+VFH+H+ +LGGR +WPPG Sbjct: 5 TIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAPVHVLLIPKKP--LPQLSAATPEDHALLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = -3 Query: 202 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAK------QEGLEDGFRIVINDGPNGGQSVFHIHVXLLGGRQMNWPPG 534 IF KI+ E+P+K VYEDDKVLAF DI+P AP HILIIP K + G+ E ++G + Y A+ +A+ E L G+R+V N G + GQSVFH+H+ L+GGR+M+WPPG Sbjct: 7 IFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIP--KKHIMGIQTLEPEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: HINT_SHIFL (HIT-like protein hinT OS=Shigella flexneri GN=hinT PE=4 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 217 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVXLLGGRQM 537 TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+ LLGGR + Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: HINT_ECOLI (HIT-like protein hinT OS=Escherichia coli (strain K12) GN=hinT PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 217 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVXLLGGRQM 537 TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+ LLGGR + Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: HINT_ECO57 (HIT-like protein hinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 217 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVXLLGGRQM 537 TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+ LLGGR + Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: Y961_HAEIN (HIT-like protein HI0961 OS=Haemophilus influenzae GN=HI0961 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22 Identity = 56/109 (51.38%), Postives = 77/109 (70.64%), Query Frame = -3 Query: 217 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIP-KVKDGLTGLSKAEERHCEILGRLLYXAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVXLLGGRQM 537 TIF KII KEIP+ +VY+D+ V AFRDI PQA THILIIP KV + +++ +E LGRL A +AK+EG+ EDG+R+++N +GGQ VFH+H+ L+GG + Sbjct: 5 TIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDE---VALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110
BLAST of DC900103 vs. ExPASy Swiss-Prot
Match: PKIA_DICDI (Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = -3 Query: 202 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVK-DGLTGLSKAE-ERHCEILGRLLYXAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVXLLGGRQMNWPPG 537 TIF KII+ IPSK Y+D+ +A DI+PQAP H+L+IPK+ GL+ ++ + E++ E +G ++ +A +G D +R+VIN+G G QSV +H+ +LGGRQMNWPPG Sbjct: 15 TIFAKIISGAIPSKKFYDDEYCIAIEDINPQAPVHLLVIPKLAVGGLSDVANVDLEKYKESMGHIMSKIHHIASLKG-ADSYRLVINEGVLGQQSVRWLHIHILGGRQMNWPPG 127 The following BLAST results are available for this feature:
BLAST of DC900103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900103 ID=DC900103; Name=DC900103; organism=Citrus sinensis; type=EST; length=668bpback to top |