CN185950

Overview
NameCN185950
Unique NameCN185950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.169e-41
Identity = 87/168 (51.79%), Postives = 111/168 (66.07%), Query Frame = -3
Query:  327 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSE 821
            L LPPGFRF+PTDEEL+V+YL RK         +I E+D+ K DPW LP       +E YFFS R+ KYPNG+R NR  GSGYWKATG DK I+T    + VG+KK LVFY GK P G++T+WIMHEYRL+     P ++N     +   D+WVLCRI+ K+  A+ +
Sbjct:   12 LSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTE--GRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRN----GSTKLDDWVLCRIYKKQTSAQKQ 169          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 77/159 (48.43%), Postives = 107/159 (67.30%), Query Frame = -3
Query:  348 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLK 815
            +PPGFRFHPTDEEL+  YL +K+       + I +VD+ KS+PW+LP       +E YFF+ R+ KYP G R+NRAT +GYWKATG D++I +S+   ++GMKKTLVFY+G+ P G ++ W+MHEYRL        K ++    + A D WVLC++ LK
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL------DGKFSYHYISSSAKDEWVLCKVCLK 172          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 82/165 (49.70%), Postives = 105/165 (63.64%), Query Frame = -3
Query:  330 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKS 815
            LPPGFRFHPTDEEL+  YL  KIF   L    I EVD+ + +PW+LP       +E YF+S R+ KYP G R+NRAT +GYWKATG DK++ +  G Q+VGMKKTLVFY+G+ P G +T W+MHEYRL         +N         + WV+CR+F K    K+
Sbjct:   22 LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL---------ENDHSHRHTCKEEWVICRVFNKTGDRKN 177          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39
Identity = 84/170 (49.41%), Postives = 109/170 (64.12%), Query Frame = -3
Query:  327 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIF----LKKRGAKSE 815
            LPPGFRFHPTDEEL+  YL RK+      +  I EVD+ K +PW LPG      +E YFFS R+ KYP G R+NRAT +GYWKATG D++I +S+   +VGMKKTLVFY+G+ P G +++W+MHEYRL        K ++      + D WV+ R+F    L   GA SE
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL------EGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSE 180          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39
Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = -3
Query:  345 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 821
            L LP GFRFHPTDEELV  YL R+  + P+   +I E+D+ K +PW+LP       +E YFFS R+ KYPNG+R NRA G+GYWKATG DK I   +    +G+KK LVFY GK P G +T+WIMHEYRL   AN  +  +  +   +  D+WVLCRI+ KK
Sbjct:   48 LNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPK---TLGIKKALVFYAGKAPKGIKTNWIMHEYRL---ANVDRSASTNKKNNLRLDDWVLCRIYNKK 203          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.462e-39
Identity = 93/231 (40.26%), Postives = 135/231 (58.44%), Query Frame = -3
Query:  219 NGVLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLP-----GDVAQ-ERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAV-----ATDNWVLCRIFLKKRGAKSEDEETCTEIGGTRANG----PKPV------------FYDFMRKEERADLNLVP 830
            NG  ++PPGFRFHPT+EEL+  YL++K+ +  +   +I +VD+ K +PWD+      G   Q + YFFS ++ KYP G R+NRAT +G+WKATG DK I  S G +I GM+KTLVFY+G+ PHG ++DWIMHEYRL     +P+     +  ++       + WV+CRIF KK   K+ +    + +GG   +G    PK              F + M +  + +LNL P
Sbjct:   11 NGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK-IIYSNGRRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLN----SPVGGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDP 235          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 81/167 (48.50%), Postives = 104/167 (62.28%), Query Frame = -3
Query:  345 GVLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPG------DVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 827
            G L +PPGFRFHPTDEEL+  YL++K+    +   +I E+D+ K +PWDL            E YFFS ++ KYP G R+NRAT +G+WKATG DK I  +   +I GM+KTLVFY G+ PHG +TDWIMHEYRL                 V  D WV+CR+F+KK
Sbjct:    6 GALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRI-GMRKTLVFYVGRAPHGKKTDWIMHEYRL-----------DQDNVDVQEDGWVVCRVFMKK 160          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 81/186 (43.55%), Postives = 118/186 (63.44%), Query Frame = -3
Query:  324 KIDFMKNGVLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLP-----GDVAQ-ERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQT-----PAVATDNWVLCRIFLKKRGAKSED 848
            K++   NG  ++PPGFRFHPT+EEL+  YL++K+ +  +   +I EVD+ K +PWD+      G   Q + YFFS ++ KYP G R+NRAT +G+WKATG DK I +    + +G++KTLVFY+G+ PHG ++DWIMHEYRL    + P    +A        +   + WV+CR+F KK   K +D
Sbjct:    5 KVNLSINGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSC--VRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL---DDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKKNYQKIDD 185          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 81/178 (45.51%), Postives = 116/178 (65.17%), Query Frame = -3
Query:  330 NGVLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLP-----GDVAQ-ERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL----VTAANAPQKKNFAQTPAVATD-NWVLCRIFLKKRGAKS 830
            NG  ++PPGFRFHPT+EEL+  YL++KI    +   +IP++D+ K +PWD+      G   Q + YF+S ++ KYP G R+NRAT  G+WKATG DK I T+ G++I GM+KTLVFY+G+ PHG ++DWIMHEYRL    + ++      N      + +D  WV+CR+F K    K+
Sbjct:    6 NGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTN-GDRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKN 181          
BLAST of CN185950 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.114e-37
Identity = 80/182 (43.96%), Postives = 113/182 (62.09%), Query Frame = -3
Query:  339 KNGVLRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQI--------------ATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRG 833
            ++G L LPPGFRFHPTD E+++ YL +K+      +  I EVD+ K +PWDLP       +E YFFS ++ KYP G R+NRAT  GYWKATG D++I              ++++  Q+VGMKKTLVFY G+ P G++T+W+MHE+RL    +A    +         D WV+C++F KK+G
Sbjct:   13 QDGGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL----HANLHNHHPNLRLNPKDEWVVCKVFHKKQG 190          
The following BLAST results are available for this feature:
BLAST of CN185950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC55_ARATH2.169e-4151.79NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC54_ARATH9.112e-4048.43Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC31_ARATH9.112e-4049.70Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC98_ARATH2.030e-3949.41Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NA102_ARATH2.030e-3951.85NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC43_ARATH3.462e-3940.26NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC76_ORYSJ1.718e-3848.50NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC12_ARATH1.718e-3843.55NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC66_ARATH5.000e-3845.51NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC77_ORYSJ1.114e-3743.96NAC domain-containing protein 77 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002C01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185950 ID=CN185950; Name=CN185950; organism=Citrus sinensis; type=EST; length=853bp
ATACTTGATGATGATGGCTAATTGGGTATTCTGATTTTTCTAACCATAAA
CGCCAATTACTTGTACAGAACACTAATTAAAAAGAGAGAAATTATTGAAA
ATGTTTACTGCTGTTTTCTTCTAAAGTAAGGGAAGCTATTGCAACTACTC
TCTTCATGATCGTCTGATTCATTTGAAGAAACTTCAGTGACTCCACTTGA
GCCTGAGGAAGATGAAGTTGGAACAAGGTTCAAGTCAGCCCTTTCCTCCT
TTCTCATAAAATCATAAAAAACCGGCTTGGGCCCGTTAGCCCTGGTTCCT
CCAATTTCGGTGCACGTTTCCTCATCCTCACTCTTGGCTCCTCTTTTCTT
CAAAAAGATGCGGCATAGAACCCAATTGTCCGTTGCCACAGCTGGGGTCT
GGGCGAAGTTTTTCTTTTGAGGGGCATTGGCAGCAGTAACAAGGCGGTAT
TCATGCATGATCCAATCAGTCCTAGAGCCGTGTGGTGGCTTGCCTCTATA
AAAAACGAGAGTTTTTTTCATTCCCACGATTTGGTTGCCCCTGGAAGTCG
CAATTTGCTTGTCAAGCCCAGTTGCCTTCCAATAACCAGACCCCGTGGCC
CTGTTCGATCTGTTCCCGTTTGGGTACTTAGCTTCCCTTGTGCTGAAAAA
ATACCTCTCTTGCGCCACATCACCTGGCAAATCCCAAGGATCAGACTTGC
AAACATCAACTTCAGGAATTATGGAAGCGGGCAAGGGGCAGGCAAAAATC
TTGCGCTTCAAGTACTGAACAACAAGTTCTTCGTCCGTAGGATGGAACCG
GAATCCCGGAGGCAGTCTCAGCACACCATTCTTCATAAAATCGATCTTCT
CCA
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