CN185949

Overview
NameCN185949
Unique NameCN185949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.126e-31
Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDEE KKKVD KNALENYAY+MRNT+ D+KI SKL   DKKKIED +D AI  LD NQL E +EFEDKMKELES+CNPIIAKMYQ
Sbjct:  140 KAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELESLCNPIIAKMYQ 226          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26
Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KA+DE  K ++ AKNALE+YA+NM+ T++DEK+  K+   DKKKI++  D+ ++WLD NQ AE DEFE + KELES+CNPII K+YQ
Sbjct:  525 KADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQ 611          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.333e-24
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KA+DE  K ++ AKN LE+YA+N++ T++DEK+  K+ P DKKKIED  D+ ++WLDSNQ AE +EFE + K+LE + NPII+K+YQ
Sbjct:  527 KADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.333e-24
Identity = 47/84 (55.95%), Postives = 69/84 (82.14%), Query Frame = 2
Query:   14 DEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            D+E  KKV+AKN+LENYAYNMRNT++++K+ S+L  +DK+ +E A+  A+ WL++NQ+AE +EFE  +KELE +CNPII ++YQ
Sbjct:  534 DDEQLKKVEAKNSLENYAYNMRNTIREDKVASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLKELEGLCNPIITRLYQ 617          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.970e-24
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.970e-24
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.970e-24
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.616e-24
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 262
            K+EDE +  +++AKN LENYAYN+RNT+ DEK+  K+D +DKK I+D +   I WLD NQ AE +EFE K KELE I NPI+ KMY
Sbjct:  529 KSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEFEAKQKELEGIANPIMQKMY 614          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.640e-24
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 109.768 bits (273), Expect = 8.640e-24
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
The following BLAST results are available for this feature:
BLAST of CN185949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP70_LUPPO1.126e-3177.01Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]
HSP70_BRUMA9.231e-2657.47Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP7A_CAEEL1.333e-2455.17Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_CHLRE1.333e-2455.95Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HS71B_BOVIN2.970e-2457.47Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU2.970e-2457.47Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN2.970e-2457.47Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP70_ACHKL6.616e-2458.14Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP71_PONAB8.640e-2457.47Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN8.640e-2457.47Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002B24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185949 ID=CN185949; Name=CN185949; organism=Citrus sinensis; type=EST; length=539bp
CATTAAGGCTGAAGACGAGGAGCACAAGAAGAAGGTCGACGCCAAGAATG
CCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAG
ATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCAT
TGATCAGGCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATG
AATTTGAAGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATT
GCCAAGATGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGA
TGATGCTCCTCCAGCTGGTGGCAGTGCCGCCGGTCCCAAGATTGAGGAAG
TTGACTAAGCTTCCAGTTTTATTTTGTTGTGTTTGTGGGAGGTCGGTTTT
TTGACGGTGGGAAAACTGGACGTTTGGTTTTTATCTTATGTTGTTTTAGC
CTTAGGATGAATATTAATTTTTCCTTTTCTTTTTATTTTTCAAATTTTAC
TTTTAATTCGGACCAATTTATATAATGAATATTTTTCGG
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