CN185949

Overview
NameCN185949
Unique NameCN185949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.514e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  +++V AKNALE+YA NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  523 KAEDEVQRERVSAKNALESYALNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 609          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.514e-23
Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 262
            K+EDE +K +++AKN LENY+YN+RNT+ DEK+  ++   DKK IED + + I WLD+NQ AE +E+E K KELE I NPI+ KMY
Sbjct:  529 KSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMY 614          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.288e-23
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK+KI D  ++ I WLD NQ AE DE+  + KELE +CNPII K+YQ
Sbjct:  524 KAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.288e-23
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK KI D  ++ I WLD NQ AE DE+E + K+LE +CNPII K+YQ
Sbjct:  526 KAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.288e-23
Identity = 46/86 (53.49%), Postives = 67/86 (77.91%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 262
            KAEDEE   ++ ++NALE+YAYN+RN++ DEK+  K D ADKKK+EDA++  I WLD++Q A  +E+E+  KELE++ NPI+ K+Y
Sbjct:  524 KAEDEEATARITSRNALESYAYNLRNSLTDEKLADKFDAADKKKLEDAVNSTISWLDNSQEASKEEYEEHQKELEAVANPIMQKLY 609          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.600e-23
Identity = 47/85 (55.29%), Postives = 66/85 (77.65%), Query Frame = 2
Query:   11 EDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            EDE+ K+ + AKNALE+Y +NM++T++DEK+  K+  +DK+ I D  +  I+WLDSNQLA+ +E+E K KELE ICNPII K+YQ
Sbjct:  528 EDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.600e-23
Identity = 44/87 (50.57%), Postives = 68/87 (78.16%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            K +DE+ K +V++KN LENYA+ ++N++KDEK+ +K+  +DK  IE   +  ++WL+SNQ AE DE+EDKMK LE++ NPI++K+YQ
Sbjct:  524 KQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQ 610          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.600e-23
Identity = 48/87 (55.17%), Postives = 67/87 (77.01%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D   + + WL++NQLAE +EF+ K KELE++CNPII K+YQ
Sbjct:  528 KAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFDHKRKELENMCNPIITKLYQ 614          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.600e-23
Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI    ++ + WL++NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  528 KAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQ 614          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.314e-23
Identity = 45/87 (51.72%), Postives = 69/87 (79.31%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            K EDE+ + +V AKN LE+YA++M++TV+DEK+  K+  +D+++I +  ++ ++WLD NQ AE +E+E + KELES+CNPIIAKMYQ
Sbjct:  528 KQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQ 614          
The following BLAST results are available for this feature:
BLAST of CN185949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP71_CERAE2.514e-2357.47Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_BRELC2.514e-2355.81Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP7C_ORYLA4.288e-2355.17Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_ICTPU4.288e-2355.17Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP71_PUCGR4.288e-2353.49Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP7D_MANSE5.600e-2355.29Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HS7C1_DICDI5.600e-2350.57Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HS71L_RAT5.600e-2355.17Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_BOVIN5.600e-2355.17Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP70_ECHGR7.314e-2351.72Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002B24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185949 ID=CN185949; Name=CN185949; organism=Citrus sinensis; type=EST; length=539bp
CATTAAGGCTGAAGACGAGGAGCACAAGAAGAAGGTCGACGCCAAGAATG
CCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAG
ATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCAT
TGATCAGGCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATG
AATTTGAAGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATT
GCCAAGATGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGA
TGATGCTCCTCCAGCTGGTGGCAGTGCCGCCGGTCCCAAGATTGAGGAAG
TTGACTAAGCTTCCAGTTTTATTTTGTTGTGTTTGTGGGAGGTCGGTTTT
TTGACGGTGGGAAAACTGGACGTTTGGTTTTTATCTTATGTTGTTTTAGC
CTTAGGATGAATATTAATTTTTCCTTTTCTTTTTATTTTTCAAATTTTAC
TTTTAATTCGGACCAATTTATATAATGAATATTTTTCGG
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