CN185949

Overview
NameCN185949
Unique NameCN185949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.398e-20
Identity = 42/87 (48.28%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            KA+DE  ++KV AKN LE+ A+NM++TV+ + +  K+   D+KKI D  +Q I W+++NQ+AE +E+E + KELE +CN II K+YQ
Sbjct:  528 KADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ 614          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.398e-20
Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 2
Query:   14 DEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            D+  +  ++AKN LENYAY+M+NTV D  +  KL+ +D+  +  AID A++WL+SNQ A  +E+E + KELES CNPI+ KMYQ
Sbjct:  106 DKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQ 189          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20
Identity = 45/86 (52.33%), Postives = 67/86 (77.91%), Query Frame = 2
Query:   11 EDEEHKKKVDAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            ED++ K+KVDAKN LE+YAY+++N + D EK+G+KL   DK+KI +A+D+AI+WL+SN  AE++ F +K  ELE I  PI+ K+Y+
Sbjct:  560 EDKKVKEKVDAKNELESYAYSLKNQIGDKEKLGAKLSDEDKEKITEAVDEAIKWLESNAEAESEAFNEKKTELEGIVQPIMTKLYE 645          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20
Identity = 41/87 (47.13%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            K +D++ K+++++KN LENY ++++N++ D+KI SKL  +DK  IE   +  ++WL+SNQ AE DEF  K+ +LESI NPI++K YQ
Sbjct:  527 KEQDQQQKERIESKNNLENYIFSVKNSINDQKIISKLSKSDKNIIESETESTLKWLESNQSAEKDEFNQKISDLESIVNPILSKFYQ 613          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 262
            K EDE+   +V AKN LE+YAY+++NT+ D ++  K+   DK+K+  AID+ I WLD++Q A  +E+EDK KELES+ NPII+  Y
Sbjct:  525 KEEDEKEAARVQAKNQLESYAYSLKNTINDGEMKDKIGADDKEKLTKAIDETISWLDASQAASTEEYEDKRKELESVANPIISGAY 610          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19
Identity = 39/87 (44.83%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            K EDE+ +K V++K+ LENY Y+M+NT+ ++++  KL   +     + I +A++W+++NQLAE DEFEDK+K +E +CNP++ K+YQ
Sbjct:  527 KEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQ 613          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19
Identity = 40/86 (46.51%), Postives = 61/86 (70.93%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 262
            KAEDE    ++  KN LE+YAY++RN+++  K+  KL+  DK+K++  ID+ +QWLD NQ A  +E+E + KELE++ NPI+ K Y
Sbjct:  525 KAEDEAEASRIRPKNGLESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEIDKTVQWLDENQTATKEEYESQQKELEAVANPIMMKFY 610          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.686e-19
Identity = 40/84 (47.62%), Postives = 61/84 (72.62%), Query Frame = 2
Query:   14 DEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            DE+ + +++AKN LE+Y + +R+T+ DE + S+  PAD++ I+    + I WLD+NQLAE  EFE K +ELE IC+PII ++YQ
Sbjct:  529 DEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQLAERQEFEHKQQELERICSPIITRLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 39/85 (45.88%), Postives = 63/85 (74.12%), Query Frame = 2
Query:   11 EDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 265
            EDE+ K+ + AKN LE+Y +NM+ T+ ++ + +K+  +D+  I D  ++ I+WLD+NQLA+ +E+E + KELE +CNPII K+YQ
Sbjct:  528 EDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQ 612          
BLAST of CN185949 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 40/86 (46.51%), Postives = 63/86 (73.26%), Query Frame = 2
Query:    5 KAEDEEHKKKVDAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 262
            KAED+  +++++AKN LE YA+N+++ V D    SKL P DK+ +  A++  +QWLDSN LA+ +EF  K++EL+  C+PI+AKM+
Sbjct:  526 KAEDDAQRERINAKNQLEGYAFNLKSAVDDAAAQSKLSPGDKETVTKAVNDVLQWLDSNSLADKEEFTYKLEELQKTCSPIMAKMH 611          
The following BLAST results are available for this feature:
BLAST of CN185949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HSP70_PLEWA3.398e-2048.28Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_LEIBR3.398e-2051.19Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
GRP78_APLCA5.796e-2052.3378 kDa glucose-regulated protein OS=Aplysia califo... [more]
HS7C3_DICDI7.569e-2047.13Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP71_CANAL9.886e-2050.00Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_THEPA1.291e-1944.83Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_AJECA1.291e-1946.51Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP7A_DROME1.686e-1947.62Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP7D_DROME2.876e-1945.88Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP74_PARLI2.876e-1946.51Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002B24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185949 ID=CN185949; Name=CN185949; organism=Citrus sinensis; type=EST; length=539bp
CATTAAGGCTGAAGACGAGGAGCACAAGAAGAAGGTCGACGCCAAGAATG
CCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAG
ATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCAT
TGATCAGGCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATG
AATTTGAAGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATT
GCCAAGATGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGA
TGATGCTCCTCCAGCTGGTGGCAGTGCCGCCGGTCCCAAGATTGAGGAAG
TTGACTAAGCTTCCAGTTTTATTTTGTTGTGTTTGTGGGAGGTCGGTTTT
TTGACGGTGGGAAAACTGGACGTTTGGTTTTTATCTTATGTTGTTTTAGC
CTTAGGATGAATATTAATTTTTCCTTTTCTTTTTATTTTTCAAATTTTAC
TTTTAATTCGGACCAATTTATATAATGAATATTTTTCGG
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