CN185938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13 Identity = 63/207 (30.43%), Postives = 96/207 (46.38%), Query Frame = 3 Query: 99 ETEALKAFKNGITSDPLGALADWNATNQIHHC--NWSGITCDHSSNHVIAIKLVDKQLQGQISPFLGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTIP 713 +T AL + + S G L+ W A+ C NW GITC S + V IKL L G + L L+++ D+S N+ G +P QL L L L N +GS I + L+ ++L N LK + TSL L L N G++P +L S + +N+ G+I + + L L+ L+++ N +G IP Sbjct: 31 DTSALNIMFSSMNSP--GQLSQWTASGG-DPCGQNWKGITC--SGSRVTQIKLPSLGLSGSLGFMLDKLTSVTEFDMSNNNLGGDLPYQLP--PNLERLNLANNQFTGSAQYSISMMAPLKYLNLAHNQLK-QLAIDFTKLTSLSILDLSSNAFIGSLPNTCSSLTSAKSIYLQNNQFSGTIDI-LATL-PLENLNIANNRFTGWIP 227
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 54/177 (30.51%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 192 CNWSGITCDHSSNHVIAIKLVDKQLQGQISPFLGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEI-GSLQNLQAMDLGKN-FLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIG--NLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTI 710 C W+ I C + V I++ LQG +SP L NLS L+ L+L N+ SG +P+ G S ++ + N+ SIP ++ L +LQ++++ N F IPES+ N ++L N++G++P +G L + N L G +P+S+ + +Q+L ++ L+G I Sbjct: 53 CKWTHIVCT-GTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPVPSLSGLAS--LQVLMLSNNNFDSIPSDVFQGLTSLQSVEIDNNPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSILHLAFNNLEGELPMSLAGSQ-VQSLWLNGQKLTGDI 225
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: LRRC1_HUMAN (Leucine-rich repeat-containing protein 1 OS=Homo sapiens GN=LRRC1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 56/146 (38.36%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 288 LGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTIPLEIG 725 L L L+ LDL N ++P +G L +L L N LS +P EIG+L+NL +D+ +N L+ +PE I TSL L +I NL TIP IG L L + NRL +P ++G E+L L +++N L T+P IG Sbjct: 170 LTQLRRLEELDLGNNEIY-NLPESIGALLHLKDLWLDGNQLS-ELPQEIGNLKNLLCLDVSENRLE-RLPEEISGLTSLTDL-VISQNLLETIPDGIGKLKKLSILKVDQNRLT-QLPEAVGECESLTELVLTENQLL-TLPKSIG 309
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: LRC28_XENTR (Leucine-rich repeat-containing protein 28 OS=Xenopus tropicalis GN=lrrc28 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12 Identity = 54/142 (38.03%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 288 LGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTIP 713 +G+L LQ LDLS N+ P +G+ L L L N L +PPEIG L+ LQ +DL N L S+PE + C SL L + NL +IP+ + L SL NRL S+P+ +GR LQ + V N+ +P Sbjct: 84 IGSLVKLQSLDLSNNALEILCP-DIGRLKSLRHLRLTNNRLK-FLPPEIGKLKELQTLDLSTNHLV-SLPEKLYQCQSLQYL-TVDRNLLCSIPRQLCQLASLNELSMAGNRL-ASLPLDLGRSRELQYVYVDNNVQLKGLP 220
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 62/211 (29.38%), Postives = 99/211 (46.92%), Query Frame = 3 Query: 84 SLEEVETEALKAFKNGITSDPLGALADWNATNQIHHCNWSGITCDHSSNHVIAIKLVDKQLQGQISPFLGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTIPL 716 SL + AL +FK+ T+D L ++ T + +C W G+ C + ++ + L L+G S A L + QL L+L NSL G IP ++ L NL+++ L +N G+ P SI + L+ L + NN +G+IP +I L L NR G++P S+ + L + +VS N L+G IP+ Sbjct: 29 SLLPSDAVALLSFKS--TADLDNKLL-YSLTERYDYCQWRGVKC--AQGRIVRLVLSGVGLRGYFSS-----------------------ATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLP-SLNQ-SFLTSFNVSGNNLTGVIPV 208
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: LRRA_DICDI (Leucine-rich repeat protein lrrA OS=Dictyostelium discoideum GN=lrrA PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 273 QISPFLGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLT-GTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTIPLEIG 725 Q P L NL L++L + N +P LG S+L EL + N IP +I +L NLQ +DL N ++ +P + N +L L L N LT IP +IG L++L+ + +N L+ ++P + ++AL+ + S N L IP EIG Sbjct: 237 QYVPQLSNLRQLKILSIR-NLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMR-IVPREVGNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLI-ALPPEIASMKALKEFEASNNQLQ-AIPTEIG 384
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: LRCH4_HUMAN (Leucine-rich repeat and calponin homology domain-containing protein 4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11 Identity = 48/141 (34.04%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 276 ISPFLGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNML 698 ++P LGNL+AL L+LS N S +P + C + + N+ G++PP+IG+L +L+ +D+ N L+ S+P +C +SL L + N L+ T+P+++G+L +++ + + V IPVS RL LQ + + N L Sbjct: 106 LNPALGNLTALTYLNLSRNQLS-LLPPYI--CQLPLRVLIVSNNKLGALPPDIGTLGSLRQLDVSSNELQ-SLPSELCGLSSLRDLNVRRNQLS-TLPEELGDLPLVRLDFSCNR--VSRIPVSFCRLRHLQVILLDSNPL 239
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: PIDD_HUMAN (Leucine-rich repeat and death domain-containing protein OS=Homo sapiens GN=LRDD PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 297 LSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLSGTIP 713 + L L LS N S +P LG L LT+ +N L ++PP +G+L LQ +DL +N L ++P I SLL L L N L ++P + L SL++ V H+ L+ S+P + RL L LD+ N L P Sbjct: 147 MRGLGALLLSHNCLS-ELPEALGALPALTFLTVTHNRLQ-TLPPALGALSTLQRLDLSQNLL-DTLPPEIGGLGSLLELNLASNRLQ-SLPASLAGLRSLRLLV-LHSNLLASVPADLARLPLLTRLDLRDNQLRDLPP 280
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 198 WSGITCDHSSNHVIAIKLVDKQLQGQISPFLGNLSALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQM 602 W+ I C+ N V ++ L L+ ISP G+L L+ LDL S +G+I +G L +L L +N L S E+ L NL+ +DL N L+GS+PE++ L L L NNL G +P+ + N+ L++ Sbjct: 376 WNHIECE--GNRVTSLFLSKINLRS-ISPTFGDLLDLKTLDLHNTSLTGAIQ-NVGSLKDLQKLNLSFNQLE-SFGSELEDLVNLEVLDLQNNSLQGSVPETLGKLKKLRLLNLENNNLVGPLPQSL-NITGLEV 504
BLAST of CN185938 vs. ExPASy Swiss-Prot
Match: CYAA_NEUCR (Adenylate cyclase OS=Neurospora crassa GN=cr-1 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 44/134 (32.84%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 300 SALQVLDLSLNSFSGSIPAQLGQCSQLAELTLYYNSLSGSIPPEIGSLQNLQAMDLGKNFLKGSIPESICNCTSLLALGLIFNNLTGTIPKDIGNLISLQMFVAYHNRLVGSIPVSMGRLEALQALDVSQNMLS 701 S L LD+S N ++L + + L +L L N L S+PP +G+ ++L+ +++ NFL P IC +++ L L FN++ +P ++ L +L+ FV +NRL G I S+ L +L+ LD+ N +S Sbjct: 939 SKLTYLDVSNNRLQDLDHSELSKLTGLLKLNLANNCLR-SLPPTLGAYKSLRTLNISSNFLD-VFPSFICELETIVDLDLSFNSINN-LPDNLMKLRNLEKFVITNNRLSGPISESVRDLVSLRELDIRYNQIS 1069 The following BLAST results are available for this feature:
BLAST of CN185938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185938 ID=CN185938; Name=CN185938; organism=Citrus sinensis; type=EST; length=725bpback to top |