CN185933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.511e-17 Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 LKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGK Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGK 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 43/46 (93.48%), Postives = 46/46 (100.00%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 +KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGK Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGK 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 LKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+ Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGR 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 LKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+ Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGR 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = -1 Query: 276 LGGVRNVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAPEGGQKKLFEAKVWEKPWMQFKELKEFNPVA 545 LGGV++ A N E + LARFAV EHN K N+ L+F +G ++ T+E EGG KKL+EAKVWEK W FK+L+EF P A Sbjct: 17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 LKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+ Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGR 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 LKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+ Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGR 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = -1 Query: 285 QQTMATLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAPEGGQKKLFEAKVWEKPWMQFKELKEFN 563 QQ +GGVR+++A AN+ ++ +LARFAVDEHNK +N L++ +GT++ +T+E +G K++EAKV EK W K+L+ FN Sbjct: 4 QQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 LK IENKINRQVTFAKRR LLKKAYELSVLCDAEVALIIFSNRGK Sbjct: 8 LKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGK 53
BLAST of CN185933 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 3 Query: 561 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 698 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL++FSNRG+ Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGR 69 The following BLAST results are available for this feature:
BLAST of CN185933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185933 ID=CN185933; Name=CN185933; organism=Citrus sinensis; type=EST; length=698bpback to top |