DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.590e-73 Identity = 138/229 (60.26%), Postives = 173/229 (75.55%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH+DFIKNMITGTSQAD AVLII + G FE G S++G T++HALLA+T+G+KQ I NKMD T Y + R++EIV+ VS +L K+GY + + ++PISGF+GDNM+E+S NL WYKGPTL EALD+ PKRP KPLR+P+QDVYKI GIGTVPVGRVETGVLK GM V F +G T+EVKS+E HH L EA PG NVGFN + K++K G+V +++ PP Sbjct: 95 GHKDFIKNMITGTSQADAAVLIIAAKKGEFEDGFSREGSTKDHALLAYTMGIKQAIVAINKMD--TIDYDEERFNEIVENVSDHLGKIGYKKENVKYIPISGFDGDNMLEQSENLPWYKGPTLTEALDEFKVPKRPIKKPLRVPIQDVYKIAGIGTVPVGRVETGVLKRGMEVQF-TTGATSEVKSLEAHHNKLEEAEPGLNVGFNVR-LEAKEIKAGHVCGDAKNDPP 319
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 7.890e-73 Identity = 128/235 (54.47%), Postives = 170/235 (72.34%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTREHA+LA T+G+ Q+I NKMDAT P +S+ RY++I + +LK +GY+ K+PF+P+S + GDN+IERS N+ WY GPTL+EALD + P +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G V F P EV+S+E HH + +A PGDN+GFN + S +D++RG VA + P FT Sbjct: 94 GHRDFVKNMITGASQADAALLVVSARKGEFEAGMSPEGQTREHAILAKTMGINQLIVAVNKMDATEPPWSQKRYEQIKTILGKFLKSLGYDISKVPFIPVSAWTGDNLIERSPNMPWYNGPTLVEALDSLEPPPKPIDKPLRIPIQDVYAISGVGTVPVGRVETGVLRVGDKVVFMPPAKVGEVRSIETHHVRIEKAEPGDNIGFNVRGVSKRDIRRGDVAGHLDNPPTVAEEFT 328
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.030e-72 Identity = 132/237 (55.70%), Postives = 173/237 (73.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEP--KRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDFIKNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G+ Q+I NKMDAT P +S+ RY +IV+ + ++K +G+ D+IPFVP+S + GDN+I+RS N+ WYKGPTL+EALD + P ++ PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P G+ EV+S+EMHHE + +A+PGDN+GFN + S D+KRG VA + P FT Sbjct: 95 GHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPFVPVSAWTGDNIIKRSENMPWYKGPTLVEALDNLKPPSVEKWAKLPLRIPIQDVYSITGVGTVPVGRVETGVLKVGDKVVFMPPGVGGEVRSIEMHHEKIEQAMPGDNIGFNVRGVSKNDIKRGDVAGHPENPPTVADQFT 331
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.758e-72 Identity = 126/223 (56.50%), Postives = 167/223 (74.89%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASN 671 GHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G++Q+I NKMDA Y + RY+ +V + ++K +GY DKIPF+P+S ++GDN+IERS N+ WY GPTL+EALDQ+ P +P DKPLR+P+Q+VY I G GTVPVGRVETGVL+ G V F P G+ EV+S+EMH++ L +A PGDN+GF + S D+KRG VA + Sbjct: 93 GHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGH 315
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.260e-70 Identity = 146/260 (56.15%), Postives = 177/260 (68.08%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK----YSKARYDEIVKEVSSYLKKVGYNP------------------DK--------IPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG-LTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GHRDFIKNMITGTSQAD A+L+ID FEAGI++ G T+EHALLA+TLGVKQ+ NKMD K +++ RY+E+V + L K+G+ DK FVPISG+ GDNM+E+STN+ WY GPTL E LD + PKRPT+ PLRLPLQDVYKIGGIGTVPVGRVETG+LK GM VTF P+G EVKSVEMHH S+ +A+PGDNVGFN K +VKD+KRG V +++ PP Sbjct: 94 GHRDFIKNMITGTSQADVALLVIDGNN--FEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIGFKKKDKGDKKKGDKKEKKDKKDKGEKKYVCSATFVPISGWTGDNMLEKSTNMPWYTGPTLFEVLDAMKPPKRPTEDPLRLPLQDVYKIGGIGTVPVGRVETGILKAGMQVTFEPAGKAAVEVKSVEMHHTSVPQAIPGDNVGFNVK-LTVKDIKRGDVCGDTKNDPP 350
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70 Identity = 124/235 (52.77%), Postives = 163/235 (69.36%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + RY EIV +VS +++ G+N +K+ FVP+ GDN+ RS N+ WY GPTL E LDQ+ P +P DKPLR+P+QDVY I G+GTVPVGRVE+GVLK G + F P+G EV+S+E HH + +A PGDN+GFN + KD+KRG V + P FT Sbjct: 93 GHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPAGDNITHRSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDKIVFMPAGKVGEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPTVADEFT 327
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.179e-68 Identity = 122/235 (51.91%), Postives = 163/235 (69.36%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + R+ EIV +V ++K G++ +K+ FVP+ G+N+ +RS N+ WY GPTL E LDQ+ P +P DKPLR+P+Q+VY I G+G VPVGRVETGVLK G V F P G EV+S+E HH + +A PGDN+GFN + KD+KRG VA + + P FT Sbjct: 93 GHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILAKTMGINQVIVAVNKMDLTDPPYDEKRFKEIVDQVGKFMKSFGFDMNKVKFVPVVAPTGENITQRSENMKWYTGPTLEEYLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRVETGVLKVGDKVVFMPVGKVGEVRSIETHHTKIEKAEPGDNIGFNVRGVEKKDIKRGDVAGSLNVPPTVADEFT 327
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.980e-68 Identity = 130/236 (55.08%), Postives = 168/236 (71.19%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDFIKNMITG SQAD AVL++D + GI QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K +S L KV GYNPD+I F+P + +GDN+++RS N+ WYKGPTL+EALD+ P++PT+ PLR+P+QDVY I G+GTVPVGRVETG+L+PG V F P+G++ EVKS+EMHHE + +A PGDN+GFN + S KD+KRG V + P FT Sbjct: 94 GHRDFIKNMITGASQADAAVLVVDVNDA--KTGIQP--QTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKKMLSEQLLKVLGYNPDQIDFIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSITGVGTVPVGRVETGILRPGDKVVFEPAGVSGEVKSIEMHHEQIPQAEPGDNIGFNVRGVSKKDIKRGDVCGHPDNPPTVAEEFT 323
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.793e-67 Identity = 118/235 (50.21%), Postives = 161/235 (68.51%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDF+KNMITG SQAD A+L + + G FE+G+S +GQTREH +LA T+G+ Q+I KMD P Y + RY+EI + + ++K G++ K+ F+PI G+N+ +RS N+ WY GPTL EALD + P +P DKPLRLP+Q+VY I G+GTVPVGRVE+GV+K G + F P+G + EV+S+E HH L +A PGDN+GFN + KD+KRG V ++ P FT Sbjct: 93 GHRDFVKNMITGASQADAAILAVSARKGEFESGMSLEGQTREHIILAKTMGLNQVIVAITKMDVAEPPYDQKRYNEIKETIEKFMKSFGFDMSKVKFIPIVSITGENVTKRSENMKWYNGPTLEEALDMLEIPPKPVDKPLRLPIQEVYSISGVGTVPVGRVESGVMKVGDKIVFMPAGKSAEVRSIETHHTKLEKAEPGDNIGFNVRGIDKKDVKRGDVVGHTTNPPTVAEEFT 327
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.103e-66 Identity = 126/223 (56.50%), Postives = 162/223 (72.65%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASN 671 GHRDF+KNMITGTSQAD A+L+I + G G+ + QTREHA LA TLGV QM+ NKMDAT+P YS+ RY+E+ + L+ +G+ I FVPISG++GDN+ + S N+ WYKGPTLL+ALD P++P +KPLR+P++DVY I GIGTVPVGRVETGVLKPG V F P+ +VKS+EMHHE L +A PGDN+GFN + + D+KRG V + Sbjct: 94 GHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQMVVAINKMDATSPPYSEKRYNEVKADAEKLLRSIGFKD--ISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGH 309 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |