DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.069e-61 Identity = 121/234 (51.71%), Postives = 157/234 (67.09%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++++ +V LK +GY P +PIS +EGDN++++S + WYKGPTL+EALDQI EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G +V F P+ + EVKS+EMHHE L EA PGDN+GFN + D+KRG VA ++ P Sbjct: 92 GHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDQKVFEKVKAQVEKLLKMLGYKD--FPVIPISAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPP 314
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.069e-61 Identity = 121/236 (51.27%), Postives = 157/236 (66.53%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDFIKNMITG SQAD AVL+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NPD I F+P++ GDN+ ++S N WY GPTL + +D P++PT PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFN + KD+KRG V ++ P FT Sbjct: 94 GHRDFIKNMITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLSRTLGITQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNIDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTVAADFT 323
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.823e-61 Identity = 120/236 (50.85%), Postives = 156/236 (66.10%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDFIKNMITG SQAD A+L+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NPD I FVP++ GDN+ ++S WY GPTL E +D P++PT PLRLP+QDVY I G+GTVPVGRVETG+++PG V F P+G E+K+VEMHHE L A PGDN+GFN + KD+KRG V ++ P FT Sbjct: 94 GHRDFIKNMITGASQADAAILVVNVDDA--KSGIQP--QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIRPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTVAADFT 323
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.381e-61 Identity = 118/234 (50.43%), Postives = 156/234 (66.67%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GHRDF+KNMITG SQAD AVL++ T G QT+EHA LA TLG+ ++ NKMD Y + ++ + ++V L +GY P +PIS +EGDN++++S + WY GPTL+EALDQ+ EP +PTDKPLR+P+QDVY I G+GTVPVGRVETGVL+ G +V F P+ + EVKS+EMHHE + EALPGDN+GFN + D+KRG VA ++ P Sbjct: 92 GHRDFVKNMITGASQADAAVLVVAVTDGVMP-------QTKEHAFLARTLGINNILVAVNKMDMVN--YDEKKFKAVAEQVKKLLMMLGYK--NFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPP 314
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.381e-61 Identity = 118/228 (51.75%), Postives = 148/228 (64.91%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GHRDFIKNMI G SQAD A+ +I + G FE I GQ REH L TLGV+Q++ NKMD Y + RY++I EVS LK +GY+P KI F+P+S +GDN+ +S+N WY GPTLLEALD P RP DKPLR+P+QDV+ I G GTV VGRVETGVLK G V P +V+S+E HH L +A PGDN+G N + S +D++RG V +P Sbjct: 104 GHRDFIKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIVN--YDQKRYEQIKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNVKTKSSNTPWYNGPTLLEALDTFQPPPRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVPPAKVGDVRSIETHHMKLEQAQPGDNIGVNVRGISKEDVRRGDVLGKVDNVP 329
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.381e-61 Identity = 121/234 (51.71%), Postives = 157/234 (67.09%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V LK +GY P +P S + GDN++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G +V F P+ + EVKS+EMHHE L EALPGDN+GFN + S D+KRG VA ++ P Sbjct: 92 GHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLKTLGYKD--FPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPP 314
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.381e-61 Identity = 114/224 (50.89%), Postives = 152/224 (67.86%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNS 674 GHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ RY E+V++VS LK +G+ P IPFVP S F GDN++ S WYKG T++EAL+ + P++P+ PLR+P++D Y I GIGTVPVGRVETG +K G V F P G EVKS+EMHHE + +ALPGDN+G+N + D++RG V ++ Sbjct: 94 GHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGTMKKGDKVVFMPGGAAGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHT 308
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.061e-61 Identity = 115/228 (50.44%), Postives = 148/228 (64.91%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GHRDF+KNMI G SQAD A+ +I + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ EVS LK +GY+P KI F+P+S +GDN+ +S+N WY GPTLLE D P+RP DKPLR+P+QDV+ I G GTV VGRVETGVLK G V P +V+S+E HH L +A PGDN+G N + + +D+KRG V +P Sbjct: 104 GHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVVN--YDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNIKTKSSNTPWYTGPTLLEVFDSFQPPQRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVPPAKVGDVRSIETHHMKLEQAQPGDNIGVNVRGIAKEDVKRGDVLGKPDNVP 329
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.928e-61 Identity = 119/229 (51.97%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASN 671 GHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L+ +GY P +P S + GDN++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G +V F P+ + EVKS+EMHHE L EALPGDN+GFN + S D+KRG VA + Sbjct: 92 GHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLRTLGYKD--FPVIPTSAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGH 309
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.928e-61 Identity = 120/236 (50.85%), Postives = 155/236 (65.68%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHFT 707 GHRDFIKNMITG SQAD A+L+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NP I FVP++ GDN+ ++S WY GPTL E +D P++PT PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFN + KD+KRG V ++ P FT Sbjct: 94 GHRDFIKNMITGASQADAAILVVNVDDA--KSGIQP--QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPANITFVPVASLHGDNVFKKSDRTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTVAADFT 323 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |