DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.016e-60 Identity = 113/223 (50.67%), Postives = 149/223 (66.82%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASN 671 GHRDF+KNMI G SQAD A+L++ + G FE+G+ GQTREH LA+TLG++ +I NKMD Y + RY++I E+S LK + Y+ +K+PF+P+S GDN+ +S+N+ WY GP LLEALD I P RP DKPLRLP+QDV+ I G GTV GRVE+GV+K G + P +V+S+E HH L EA GDNVG N + +DLKRG V + Sbjct: 103 GHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVVN--YDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVFSITGAGTVITGRVESGVVKVGDTIVALPPAKVGDVRSIETHHMKLEEAKAGDNVGINVRGFERQDLKRGDVVGH 323
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.633e-60 Identity = 120/228 (52.63%), Postives = 152/228 (66.67%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GHRDF+KNMITG SQAD AVL++ + G QTREH LA TLG+ ++I NKMD YS+ Y+++ EV LK+V +N + ++PIS FEGDN+ E S N W+ GP+LLEAL+ + EP+ PTD PLRLP+QDVY I GIGTVPVGRVETG + PG V+F PS + EVK+VEMHHE + +A PGDNVGFN + D++RG V S P Sbjct: 93 GHRDFVKNMITGASQADNAVLVVAADDGVAP-------QTREHVFLARTLGINELIIGVNKMDIVD--YSEETYEDVKTEVDKLLKQVQFNANDAKYIPISAFEGDNVAESSDNTSWFDGPSLLEALNNLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTVSPGDDVSFQPSDVGGEVKTVEMHHEEVDQAGPGDNVGFNVRGIGKDDIRRGDVCGPSSNAP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.306e-59 Identity = 117/220 (53.18%), Postives = 150/220 (68.18%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y + +Y +V EV+ L++V +N + F+P S FEGDN+ E S N WY GP+LLEAL+ + EP+ PTD PLRLP+QDVY I GIGTVPVGRVETG+L G V+F PS ++ EVK+VEMHHE + +A PGDNVGFN + D++RG V Sbjct: 94 GHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIDELIIAVNKMDLVD--YDENKYKAVVDEVNQLLEQVRFNTEDAKFIPTSAFEGDNVSEASENTSWYDGPSLLEALNDLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGILNTGDNVSFQPSDVSGEVKTVEMHHEEVPKAEPGDNVGFNVRGVGKDDIRRGDV 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.484e-59 Identity = 114/238 (47.90%), Postives = 154/238 (64.71%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPS----GLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIHF 704 GHRDF+KNMITG SQAD A+L+ + G + QT+EH L+ TLG+ Q+I NKMDA Y + RY+E+ +EVS L+ +G+ PD+IPF+P S F+G N+ + + WY G T+LEAL+ + EP++PT PLR+P+QDVY I GIG VPVGRVETG++K G V F P G EVKS+EMHHE + +ALPGDN+GFN + ++RG V + P + F Sbjct: 94 GHRDFVKNMITGASQADAAILVCAAPDGVMQ-------QTKEHIFLSKTLGINQLIIAVNKMDAIN--YDQKRYNEVKEEVSKILRMIGFKPDQIPFIPTSAFKGTNIAKHAEETPWYTGVTILEALNALKEPEKPTQLPLRVPIQDVYTISGIGLVPVGRVETGIMKKGDKVIFRPGIDGVGHAGEVKSIEMHHEEIPQALPGDNIGFNVRGIEKNLIRRGDVCGHVDKQPTVAVEF 322
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.489e-58 Identity = 114/220 (51.82%), Postives = 146/220 (66.36%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NPD F+ S FEGDN+ + S N WY GPTLLEAL+ + P+ PTD LRLP+QDVY I GIGTVPVGR+ETGV+ G V+F PS + EVK++EMHHE + A PGDNVGFN + D++RG V Sbjct: 93 GHRDFVKNMITGASQADNAVLVVAADDGVAP-------QTREHVFLSRTLGIDELIVAVNKMDVVD--YDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTISGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIGKDDIRRGDV 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.489e-58 Identity = 114/220 (51.82%), Postives = 146/220 (66.36%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NPD F+ S FEGDN+ + S N WY GPTLLEAL+ + P+ PTD LRLP+QDVY I GIGTVPVGR+ETGV+ G V+F PS + EVK++EMHHE + A PGDNVGFN + D++RG V Sbjct: 93 GHRDFVKNMITGASQADNAVLVVAADDGVAP-------QTREHVFLSRTLGIDELIVAVNKMDVVD--YDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTISGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIGKDDIRRGDV 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 9.363e-58 Identity = 113/220 (51.36%), Postives = 149/220 (67.73%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y ++ Y ++V+EV L +V ++ + F+P+S FEGDN+ E S + WY G LLEAL+++ P+ PTD PLRLP+QDVY I GIGTVPVGRVETG+L G V+F PS ++ EVK+VEMHHE + +A PGDNVGFN + D++RG V Sbjct: 93 GHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIGELIVAVNKMDLVD--YGESEYKQVVEEVKDLLTQVRFDSENAKFIPVSAFEGDNIAEESEHTGWYDGEILLEALNELPAPEPPTDAPLRLPIQDVYTISGIGTVPVGRVETGILNTGDNVSFQPSDVSGEVKTVEMHHEEVPKAEPGDNVGFNVRGVGKDDIRRGDV 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52 Identity = 108/228 (47.37%), Postives = 146/228 (64.04%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKI-PFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG----MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASN 671 GH+DF+KNMITG SQAD AVL++ + G E QT+EHA+LA T G+ Q+I NKMD Y + R++E+ +V LK +GY + I +P + F GDN++++S + WY GPTL EALD + P+ P D PLR+P+Q I GIGTV GRVETG LKPG ++ + P+G EVKS+EMHH+ L EALPGDN+GF+ + D+ RG VA + Sbjct: 94 GHKDFVKNMITGASQADAAVLVVAADDGVQE-------QTQEHAVLARTFGINQIIVYINKMDKVN--YDQKRFEEVKNQVLKLLKMIGYKDENIIAVIPGASFHGDNVVKKSDKMPWYNGPTLYEALDMLKPPQLPVDLPLRIPIQSALSIKGIGTVLTGRVETGKLKPGDKIIVLPSKKPNGAIGEVKSIEMHHKPLEEALPGDNIGFSVRGIEKGDVMRGDVAGH 312
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41 Identity = 88/223 (39.46%), Postives = 126/223 (56.50%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLD---WYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ + F+P SG G+N+I RS + + WYKG LLE +D P+R DKP RL + DV+K G G G++E G ++ G + P T VK + +H E + A GD+V + + G + Sbjct: 347 GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSRSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCI 567
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41 Identity = 88/223 (39.46%), Postives = 126/223 (56.50%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLD---WYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ + F+P SG G+N+I RS + + WYKG LLE +D P+R DKP RL + DV+K G G G++E G ++ G + P T VK + +H E + A GD+V + + G + Sbjct: 347 GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCI 567 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |