DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CAMHC (Elongation factor Tu OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=tuf PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29 Identity = 86/234 (36.75%), Postives = 125/234 (53.42%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L+I ST G QTREH LLA +GV ++ NK D + + +EV LK+ G+ D+IP + S + + + +W K L++A+D I PKR TDK +P++D++ I G GTV GRVE G++K G +V P+ TT V VEM + L E GDNVG + + +D++RG V + + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVIASTDGPM-------AQTREHILLARQVGVPYIVVFLNKTDMVD---DPELIELVEEEVKDLLKEYGFPGDEIPIIKGSALKALEEAKAGGDGEWSAKIMELMDAVDSYIPTPKRDTDKDFLMPIEDIFSISGRGTVVTGRVEKGIVKVGDTVELVGIKPT-QTTTVTGVEMFRKELDEGEAGDNVGVLLRGTAKEDVERGMVLAKPKSITP 306
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29 Identity = 84/225 (37.33%), Postives = 117/225 (52.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ + G QTREH LLA + V ++ NK D + + + EV L K Y D++P + S +E+++ W LL A+D+ I P+R DKP +P++DV+ I G GTV GRVE GVL+PG IV L T S+EM + L EALPGDN+G + D++RG V Sbjct: 88 GHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHVLLARQVNVPYIVVFMNKCDMVD---DEELLELVELEVRELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVGSIKELLNAMDEYIPTPEREVDKPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQV 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_FERIS (Elongation factor Tu OS=Fervidobacterium islandicum GN=tuf PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29 Identity = 85/233 (36.48%), Postives = 120/233 (51.50%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---IVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK+D P+ D + EV L K + D++P V S + + + LL+A+D +P R DKP +P++DV+ I G GTV GR+E GV+KPG+ I+ T + SVEM + L EA+ GDNVG + S +++RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVLAATDGPMP-------QTREHVLLARQVNVPAMIVFINKVDMVDPEL----VDLVEMEVRDLLSKYEFPGDEVPVVRGSALKAIEAPNDPNDPAYKPIKELLDAMDTYFPDPVREVDKPFLMPIEDVFSITGRGTVVTGRIERGVIKPGVEAEIIGMSYEIKKTVITSVEMFRKELDEAIAGDNVGCLLRGSSKDEVERGQVLAKPGSITP 305
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: HBS1_YEAST (Elongation factor 1 alpha-like protein OS=Saccharomyces cerevisiae GN=HBS1 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29 Identity = 83/243 (34.16%), Postives = 129/243 (53.09%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNM--IERSTNL-DWYKGPTLLEALDQI-------NEPKRPTDKPLRLPLQDV--YKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEM--------HHESLLEALPGDNVGFNXKNXSVKDLKRGYVASN 671 GHRDF+ N I G SQAD A+L +D +T FE+G DGQT+EH LLA +LG+ +I NKMD +S+ R++EI ++ YL +G+ D I +VPISGF G+ + IE + + WY GP L+ L+ NE D L L+ + K + G++E+G ++PG +T PS + V +++ +HE A+ GD V + +D++ G +A++ Sbjct: 254 GHRDFVPNAIMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMD--NVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYKIEYTDEVRQWYNGPNLMSTLENAAFKISKENEGINKDDPFLFSVLEIIPSKKTSNDLALVSGKLESGSIQPGESLTIYPSEQSCIVDKIQVGSQQGQSTNHEETDVAIKGDFVTLKLRKAYPEDIQNGDLAAS 494
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29 Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINE----PKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA + V ++ NK+D + + EV L K GY D++P V S + + N Y+ +LE +D +++ P+R DKP +P++DV+ I G GTV GRVE G LK G IV F P T V +EM + L EA+ GDNVG + +++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVNVPYIVVFLNKVDMVD---DPELIELVEMEVRELLSKYGYPGDEVPIVKGSALKALESTSQDPNAPEYQ--CILELMDAVDKYIPTPQRDIDKPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVLAKPGTIKP 307
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CALS8 (Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tuf PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINE----PKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA + V ++ NK+D + + EV L K GY D++P V S + + N Y+ +LE +D +++ P+R DKP +P++DV+ I G GTV GRVE G LK G IV F P T V +EM + L EA+ GDNVG + +++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVNVPYIVVFLNKVDMVD---DPELIELVEMEVRELLSKYGYPGDEVPIVKGSALKALESPSQDPNAPEYQ--CILELMDVVDKYIPTPQRDVDKPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVLAKPGTIKP 307
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 84/235 (35.74%), Postives = 121/235 (51.49%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV ++ NK+D K E+V+ E+ L K Y+ + IP + +G + + W K TL++ +D I EP R DKP +P++DV+ I G GTV GR+ETG + G I+ G L + V VEM + L + GDNVG + KD++RG V S I P Sbjct: 84 GHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK----EILELVEIEIRELLSKYEYDGENIPII-----QGSALGALNGEKKWEKQIETLMKTVDNYIKEPIRNIDKPFLMPIEDVFTITGRGTVATGRIETGTINTGDSIDIIGMGIDKLNSIVTGVEMFRKILDKGQAGDNVGLLLRGIEKKDIRRGMVISKPGYITP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_FERNB (Elongation factor Tu OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=tuf PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 83/233 (35.62%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---IVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK+D D + EV L K + D++P + S + + D LL+A+D +P R DKP +P++DV+ I G GTV GR+E GV+KPG+ I+ T + SVEM + L EA+ GDNVG + +++RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKVDMVD---DPELVDLVEMEVRDLLSKYEFPGDELPVIRGSALKAVEAPNDPNHPDLKAIKELLDAMDSYFPDPVREVDKPFLMPVEDVFTITGRGTVVTGRIERGVIKPGVEAEIIGMSYETKKTVITSVEMFRKELDEAMAGDNVGCLLRGVDKDEVERGQVIAKPGSITP 306
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_THESQ (Elongation factor Tu OS=Thermotoga sp. (strain RQ2) GN=tuf PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D D + EV L + GY D++P + S + N + YK LL+A+D I EP+R DKP +P++DV+ I G GTV GR+E G +KPG I+ T V SVEM + L E + GDNVG + +++RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALKAVEA-PNDPNHEAYKPIQELLDAMDNYIPEPQREVDKPFLMPIEDVFSITGRGTVVTGRIERGRIKPGDEVEIIGLSYEIRKTVVTSVEMFRKELDEGIAGDNVGCLLRGIDKDEVERGQVLAAPGSIKP 306
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_THEP1 (Elongation factor Tu OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=tuf PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D D + EV L + GY D++P + S + N + YK LL+A+D I EP+R DKP +P++DV+ I G GTV GR+E G +KPG I+ T V SVEM + L E + GDNVG + +++RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALKAVEA-PNDPNHEAYKPIQELLDAMDNYIPEPQREVDKPFLMPIEDVFSITGRGTVVTGRIERGRIKPGDEVEIIGLSYEIRKTVVTSVEMFRKELDEGIAGDNVGCLLRGIDKDEVERGQVLAAPGSIKP 306 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |