DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_SCHPO (Elongation factor Tu, mitochondrial OS=Schizosaccharomyces pombe GN=tuf1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 84/233 (36.05%), Postives = 120/233 (51.50%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---IVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG + D A++++ +T G QTREH LLA +GVKQ++ NK+D P + + E+ L + G++ D P V SG + R + L+EA+D I P+R TD P + ++DV+ I G GTV GRVE G LK G IV +G S L T V +EM + L A+ GDN G ++ + LKRG + + + P Sbjct: 125 GHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIEL----VEMEMRELLSEYGFDGDNTPIV--SGSALCALEGREPEIGLNSITKLMEAVDSYITLPERKTDVPFLMAIEDVFSISGRGTVVTGRVERGTLKKGAEIEIVGYG-SHLKTTVTGIEMFKKQLDAAVAGDNCGLLLRSIKREQLKRGMIVAQPGTVAP 343
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27 Identity = 87/240 (36.25%), Postives = 120/240 (50.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEAL----DQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + E+V+ EV L + D +P + +S EGD +W G LLE + D I EP+R D+P +P++DV+ I G GTV GRVE G++K IV P TT V VEM + L E GDNVG + +D++RG V + I P Sbjct: 86 GHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDE----EILELVELEVRELLSSYEFPGDDVPVIRVSALKALEGDK--------EW--GAKLLELMAAVDDSIPEPQRDIDRPFLMPIEDVFTITGRGTVVTGRVERGIVKVNETVEIVGIKPETTTTTVTGVEMFRKLLDEGRAGDNVGLLLRGIKREDVERGQVIVKPKTITP 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: CYSN_CHRSD (Sulfate adenylyltransferase subunit 1 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=cysN PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27 Identity = 77/205 (37.56%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALD--QINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNV 611 GH + +NM TG S A AV++ID+ G QTR H+ +A LG++ ++ NKMD YS+AR+DEIV E + K+ N I FVP+S EGDN++ +S + WY+GP LL L+ ++ K TD LRLP+Q V + G +E G+L+PG V PSG + V + L EA PG + Sbjct: 113 GHEQYTRNMATGASTASLAVILIDARHG-------VQTQTRRHSFIADLLGIQHLVIAVNKMDLVD--YSQARFDEIVAEYREFAAKL--NAPDIHFVPLSALEGDNVVNKSEAMSWYEGPALLHLLETVEVTHDKNLTD--LRLPVQYVNRPHLDFRGYCGTLEAGILRPGQRVKVLPSGKASTVARIVTFDGDLEEAYPGQAI 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_THET2 (Elongation factor Tu OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + D++P + S + R+ +W K LL+A+D+ I P R DKP +P++DV+ I G GTV GR+E G +K G IV P T V VEMH ++L E + GDNVG + S ++++RG V + I P Sbjct: 85 GHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITP 313
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_THEM4 (Elongation factor Tu OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 84/233 (36.05%), Postives = 116/233 (49.79%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D + D + EV L K + D +P + S + + + LL+ +D+ EP+R TDKP +P++DV+ I G GTV GR+E GV++PG IV T V SVEM + L E L GDNVG + +++RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKTDMVD---DEELVDLVEMEVRELLNKYEFPGDDLPVIRGSALKAVEASNDPNDEAYAPIKELLDTMDEYFPEPQRETDKPFLMPVEDVFSITGRGTVVTGRIERGVIRPGDEVEIVGMSYEVNKTVVTSVEMFRKILDEGLAGDNVGCLLRGIDKDEVERGQVLAKPGSITP 306
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_STIAU (Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 89/236 (37.71%), Postives = 127/236 (53.81%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL--LEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + E+V+ EV LKK + D IP +P S + +E T+ D +G L + A+D+ I P+R TDKP +P++DV+ I G GTV GRVE G +K G IV P+ T + VEM + L E + GDN+G + +DL+RG V +N I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR----ELVEMEVRDLLKKYEFPGDSIPIIPGSALKA---LEGDTS-DIGEGAILKLMAAVDEYIPTPQRATDKPFLMPVEDVFSIAGRGTVATGRVERGKIKVGEEVEIVGIRPTQKTV-ITGVEMFRKLLDEGMAGDNIGALLRGLKREDLERGQVLANWGSINP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU2_THET8 (Elongation factor Tu-B OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufB PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + D++P + S + R+ +W K LL+A+D+ I P R DKP +P++DV+ I G GTV GR+E G +K G IV P T V VEMH ++L E + GDNVG + S ++++RG V + I P Sbjct: 85 GHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITP 313
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU2_MYXXD (Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 85/237 (35.86%), Postives = 126/237 (53.16%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + E+V+ EV LKK + D IP +P + EGD ++++ L+EA+D I P+R TDKP +P++DV+ I G GTV GRVE G++K G +V P+ T V VEM + L + + GDN+G + +D++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR----ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD-----TSDIGEPAILKLMEAVDSYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEVEVVGLRPTQKTV-VTGVEMFRKLLDQGMAGDNIGALVRGLKREDMERGQVLAKPGSITP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU1_THETH (Elongation factor Tu-A OS=Thermus thermophilus GN=tufA PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + D++P + S + R+ +W K LL+A+D+ I P R DKP +P++DV+ I G GTV GR+E G +K G IV P T V VEMH ++L E + GDNVG + S ++++RG V + I P Sbjct: 85 GHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITP 313
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU1_THET8 (Elongation factor Tu-A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufA PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + D++P + S + R+ +W K LL+A+D+ I P R DKP +P++DV+ I G GTV GR+E G +K G IV P T V VEMH ++L E + GDNVG + S ++++RG V + I P Sbjct: 85 GHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITP 313 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |