DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BORGA (Elongation factor Tu OS=Borrelia garinii GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27 Identity = 83/232 (35.78%), Postives = 122/232 (52.59%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINE-PKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLT--TEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ + P + S F + E + K LLE++D + P+R DKP L ++DV+ I G GTV GR+E GV+K G V T T V VEM + L + GDNVG + KD++RG V S I P Sbjct: 85 GHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVEL----VEVEVLELVEKYGFSANT-PIIKGSAFGAMSNPEDPESTKCVK--ELLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLSAPGTITP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_RICM5 (Elongation factor Tu OS=Rickettsia massiliae (strain Mtu5) GN=tuf PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 84/236 (35.59%), Postives = 120/236 (50.85%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ D+IP + + EG E + N L++A+D I +P R TDKP +P++DV+ I G GTV GRVE+G++K G IV + TT VEM + L E GDNVG + ++++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEEAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGDEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIKP 301
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_RICCK (Elongation factor Tu OS=Rickettsia canadensis (strain McKiel) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 83/236 (35.17%), Postives = 121/236 (51.27%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ D+IP + + EG E++ N L++A+D I +P R TDKP +P++DV+ I G GTV GRVE+G++K G IV + TT VEM + L E GDN+G + ++++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNIGVLLRGTKREEVERGQVLAKPGSIKP 301
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCR (Elongation factor Tu OS=Ehrlichia chaffeensis (strain Arkansas) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 85/237 (35.86%), Postives = 122/237 (51.48%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY--KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MIVTFGPSGL-TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIH 701 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK D + + + ++E+ L K GY D I V S + +E T + K L+ AL++I+ P R DKP + ++DV+ I G GTV GR+E GV++ G I G + +T VEM H++L GDN G + +D++RG V S PG IH Sbjct: 83 GHADYIKNMITGAAQMDAAILVVSATDGAMP-------QTREHILLAKQVGVKDIVVWMNKCDVVDDEEMLSLVEMEIREL---LSKYGYPGDDIDVVRGSAVKA---LEEETGSGVWSEKIMELMNALEKISLPTREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVGDKIEIVGLRDIQSTVCTGVEMFHKALDAGEAGDNAGILLRGIKKEDVERGQVLS-----APGQIH 301
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CLOK5 (Elongation factor Tu OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 84/235 (35.74%), Postives = 124/235 (52.77%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP-TLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ D +P + S + +IE + + K L+EA+D I P+RP DKP +P++DV+ I G GTV GRVE+GVLK G IV T VEM + L +A+ GDN+G + ++++RG V S + P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKSD----QVDDPELIELVEMEVRELLSEYGFPGDDVPIIVGSALK---VIENPEDAEATKCIYELMEAVDTYIPTPERPVDKPFLMPIEDVFTITGRGTVATGRVESGVLKIGDEVEIVGLKEEKKKTVCTGVEMFRKLLDQAMAGDNIGALLRGIQREEIERGQVLSKPGSVKP 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_ARTS2 (Elongation factor Tu OS=Arthrobacter sp. (strain FB24) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 86/237 (36.29%), Postives = 117/237 (49.37%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKG-PTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---IVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + D + EV L G++ D+ P V +SG EGD +W K L+ A+D+ + +P R DKP +P++DV+ I G GTV GR E G L IV P TT V +EM H+ L EA G+N G + D++RG V I P Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKADMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDP--------EWVKSVEDLMAAVDESVPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGTLAINSEVEIVGIRPVQKTT-VTGIEMFHKQLDEAWAGENCGLLLRGLKRDDVERGQVVVKPGSITP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_THEFY (Elongation factor Tu OS=Thermobifida fusca (strain YX) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPT-LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPG 692 GH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + +D + EV L + + D++P + +S EGD +W K L+EA+DQ I EP+R DKP +P++DV+ I G GTV GR+E GV+ IV +TT V VEM + L + GDNVG + ++++RG V +I PG Sbjct: 86 GHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKSDMVD---DEEIFDLVELEVRELLNEYEFPGDEVPVIRVSALKALEGDP--------EWGKKILELMEAVDQNIPEPQRDIDKPFLMPIEDVFSITGRGTVVTGRIERGVINVNDTVEIVGLKDDKITTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREEVERGQV-----VIKPG 300
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_FRASN (Elongation factor Tu OS=Frankia sp. (strain EAN1pec) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 84/240 (35.00%), Postives = 120/240 (50.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQIN----EPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + E+V+ EV L + D +P + +S EGD +W G LLE + ++ EP+R D+P +P++DV+ I G GTV GR+E G++K IV P TT V VEM + L E GDNVG + +D++RG V + I P Sbjct: 86 GHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDE----EILELVELEVRELLNTYEFPGDDVPVIRVSALKALEGDK--------EW--GEKLLELMAAVDASIPEPERDIDRPFLMPIEDVFTITGRGTVVTGRIERGIVKVNETVEIVGIKPETTTTTVTGVEMFRKLLDEGQAGDNVGLLLRGIKREDVERGQVIVKPKSITP 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_FLAPJ (Elongation factor Tu OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 81/237 (34.18%), Postives = 122/237 (51.48%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGI 698 GH D++KNM+TG +Q D A+L++ +T G QTREH LL +G+ +M+ NK+D + + ++++ S+ + Y+ D P V S G N + W K L+EA D I EP R T+KP +P++DV+ I G GTV GR+ETG+ G I+ G LT+ V +EM + L GDN G + + +D+KRG V +I PG + Sbjct: 84 GHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGIPRMVVFMNKVDMVDDEELLELVEMEIRDLLSFYE---YDGDNGPVVQGSALGGLN-----NDPAWVPKIIELMEACDSWIQEPIRDTEKPFLMPVEDVFTITGRGTVATGRIETGICNTGDPVEIIGMGAEKLTSTVTGIEMFRQILDRGEAGDNAGILLRGVAKEDIKRGMV-----IIKPGSV 300
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_ARTCA (Elongation factor Tu OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 85/236 (36.02%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---IVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + D + EV L G++ D+ P V +SG EGD + +S L+ A+D+ + +P R DKP +P++DV+ I G GTV GR E G L IV P TT V +EM H+ L EA G+N G + D++RG V I P Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDPVWVKSVE-------DLMAAVDESVPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGTLAINSEVEIVGIRPVQKTT-VTGIEMFHKQLDEAWAGENCGLLLRGLKRDDVERGQVVVKPGSITP 303 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |