DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BOVIN (Elongation factor Tu, mitochondrial OS=Bos taurus GN=TUFM PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 81/233 (34.76%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTF--GPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY ++ P + S + +R L LL+A+D I P R +KP LP++ VY I G GTV G +E G+LK G F + T V +EM H+SL A GDN+G + +DL+RG V + I P Sbjct: 129 GHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPIIVGSALCA--LEQRDPELGLKSVQKLLDAVDTYIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLGHSKNIRTVVTGIEMFHKSLDRAEAGDNLGALVRGLKREDLRRGLVMAKPGSIQP 348
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: CYSN_BACTN (Sulfate adenylyltransferase subunit 1 OS=Bacteroides thetaiotaomicron GN=cysN PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 72/228 (31.58%), Postives = 121/228 (53.07%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIP 686 GH + +NMITG S A+ A++++D+ TG QTR H L LG+K ++ NKMD +S+ R+DEIV E +++ +G PD + +P+S +GDN++++S WYKG +LL+ L+ ++ R P+Q V + G+V +G+++ G V PSG T++VKS+ + L A P +V ++ D+ RG + + +P Sbjct: 108 GHEQYTRNMITGGSTANLAIILVDARTGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLVD--FSEERFDEIVSEYKKFVEPLGI-PD-VNCIPLSALDGDNVVDKSERTPWYKGISLLDFLETVHIDNDHNFTDFRFPVQYVLRPNLDFRGFCGKVASGIVRKGDTVMALPSGKTSKVKSIVTYDGELDYAFPPQSVTLTLEDEI--DVSRGEMLVHPDNLP 322
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_SYMTH (Elongation factor Tu OS=Symbiobacterium thermophilum GN=tuf PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 81/236 (34.32%), Postives = 116/236 (49.15%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + EV L + + D+IPF+ + EGD ++ L++A+D I P+R DKP +P++DV+ I G GTV GRVE G K G IV TT V +EM + L E GDNVG + K+++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCDMVD---DEELLELVELEVRELLNQYEFPGDEIPFIRGSALKALEGDPKYVKAIE-------ELMDAVDSYIPTPQRDADKPFLMPIEDVFTITGRGTVVTGRVERGKCKVGDQVEIVGLREESKTTVVTGLEMFRKILDEVQAGDNVGALLRGIEKKEVERGQVLAKPGSIKP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_STRU0 (Elongation factor Tu OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tuf PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 80/236 (33.90%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + D +P + + EGD+ E L++ D+ I EP+R TDKPL LP++DV+ I G GTV GR++ G ++ IV V VEM + L E L GDNVG + +++RG V + I P Sbjct: 87 GHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIIM-------ELMKTADEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGIKEETKKAVVTGVEMFRKQLDEGLAGDNVGILLRGVQRDEIERGQVIAKPGSINP 305
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_RHDSA (Elongation factor Tu, chloroplastic OS=Rhodomonas salina GN=tufA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 86/243 (35.39%), Postives = 120/243 (49.38%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF------EGDNMIERSTNLDWYKGPTLLEALDQINE----PKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGL----TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L+ + G QTREH LLA +GV ++ NK D + + + EV L K + D+IPFV S G I R + W T+ E +D+I+E P+R TDK + ++DV+ I G GTV GR+E G +K G + GL TT + +EM +SL EAL GDNVG + D++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVCSAADGPMP-------QTREHILLAKQVGVPHIVVFLNKADMVD---DEELLELVELEVQELLSKYDFPGDEIPFVAGSALLALETAVGKPDIGRGED-KWVD--TIFELMDKIDEYIPTPERETDKSFLMAVEDVFSITGRGTVATGRIERGQVKVGDTIEI--IGLRETRTTTITGLEMFQKSLEEALAGDNVGILVRGIQKTDIERGMVLAAPGSITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 84/238 (35.29%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALD-QINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGI 698 GH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + E+V+ E+ L + D IP V +SG + + E +D L++A+D I EP+R +KP + ++DV+ I G GTV GR+E G +K G IV S TT V VEM + L E L GDN G + +D++RG V ++ PG I Sbjct: 84 GHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVDDE----EIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKID-----ELMDAVDTSIPEPEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTT-VTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMV-----LVKPGSI 299
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MOUSE (Elongation factor Tu, mitochondrial OS=Mus musculus GN=Tufm PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGI 698 GH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY ++ P + S + +R L LL+A+D I P R DKP LP++ VY I G GTV G +E G+LK G + + T V +EM H+SL A GDN+G + +DL+RG V M+ PG I Sbjct: 129 GHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAKQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVIVGSALCA--LEQRDPELGVKSVQKLLDAVDTYIPVPTRDLDKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECELLGHNKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLV-----MVKPGSI 346
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 81/241 (33.61%), Postives = 123/241 (51.04%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG------DNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGL----TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + EV L + + D IPFV S +N I+R N +W K +L++A+D+ I P R +K + ++DV+ I G GTV GR+E G++K G + GL TT + +EM ++L E + GDN+G + KD++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNVVVFLNKQDQVD---DEELLELVELEVRELLIQYDFPGDDIPFVAGSALLALEKVTENNSIQRGEN-EWVDKIHSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEI--VGLRETTTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMVLAQPGTITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 86/238 (36.13%), Postives = 117/238 (49.16%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGD--NMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV Q++ NK D + + + EV L + D +P + + E D N E LD LL+A D I EP R DKP +P++DV+ I G GTV GRVE GV+K G IV P+ TT VEM + L + GDN+G + D++RG V + + I P Sbjct: 84 GHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPQLVVFLNKCDLVD---DEELLELVELEVRELLSSYDFPGDDVPVIRGSALKALESDDPNSAEAKCILD------LLDACDSFIPEPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIVGIKPTVKTT-CTGVEMFRKLLDQGEAGDNIGALLRGTKRDDVERGQVLAAPKSITP 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 81/232 (34.91%), Postives = 112/232 (48.28%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D D + EV L + G+ D P V S + + + + K + E I P+RPTDK +P++DV+ I G GTV GRVETG LK G IV V VEM + L AL GDN+G + +D++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEYIVVFLNKADQVD---DPELIDLVEMEVRELLNEYGFPGDDTPIVVGSALKALQNPDDAEAIKPIKD-LMAEVDAYIPTPERPTDKAFLMPIEDVFTITGRGTVATGRVETGTLKVGDEVEIVGMKDEITKVVVTGVEMFRKILDSALAGDNIGALLRGVQREDIERGQVLAKPGSITP 304 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |